Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00035 | Canola | nucleus | 90.83 | 96.06 |
| Bra036145.1-P | Field mustard | nucleus | 94.84 | 95.39 |
| CDX86237 | Canola | nucleus | 81.38 | 82.8 |
| CDX85403 | Canola | nucleus | 80.52 | 82.16 |
| AT5G49330.1 | Thale cress | nucleus | 77.65 | 79.24 |
| CDY05636 | Canola | nucleus | 64.18 | 77.24 |
| CDX90721 | Canola | nucleus | 26.07 | 40.62 |
| CDX91687 | Canola | nucleus | 25.79 | 40.0 |
| CDY05057 | Canola | nucleus | 25.79 | 39.65 |
| PGSC0003DMT400011167 | Potato | nucleus | 30.09 | 38.89 |
| CDX91023 | Canola | nucleus | 21.2 | 37.37 |
| CDX85583 | Canola | nucleus | 21.2 | 37.37 |
| CDX69561 | Canola | nucleus | 20.92 | 37.06 |
| Solyc06g009710.2.1 | Tomato | nucleus | 31.52 | 37.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.81 | 36.88 |
| CDY09882 | Canola | nucleus | 20.63 | 36.36 |
| PGSC0003DMT400018841 | Potato | nucleus | 31.52 | 36.3 |
| CDY55384 | Canola | nucleus | 30.66 | 36.27 |
| Solyc01g079620.2.1 | Tomato | nucleus | 34.38 | 35.5 |
| Solyc12g049350.1.1 | Tomato | nucleus | 29.8 | 35.49 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 36.96 | 35.15 |
| CDX72510 | Canola | nucleus | 26.93 | 34.69 |
| CDY40652 | Canola | nucleus | 26.93 | 34.69 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 36.68 | 34.5 |
| CDY07085 | Canola | nucleus | 24.64 | 34.26 |
| CDY24177 | Canola | nucleus | 24.64 | 34.26 |
| CDY23616 | Canola | nucleus | 22.35 | 34.21 |
| CDY21378 | Canola | nucleus | 26.36 | 34.2 |
| CDY04798 | Canola | nucleus | 26.36 | 34.2 |
| CDY25747 | Canola | nucleus | 25.79 | 34.09 |
| CDX80105 | Canola | nucleus | 31.81 | 33.95 |
| CDY27055 | Canola | nucleus | 19.2 | 33.84 |
| PGSC0003DMT400023322 | Potato | nucleus | 34.96 | 33.61 |
| CDY65324 | Canola | nucleus | 19.2 | 33.0 |
| CDY12520 | Canola | nucleus | 25.5 | 32.72 |
| CDX90285 | Canola | nucleus | 26.36 | 32.51 |
| CDX69102 | Canola | nucleus | 26.36 | 32.17 |
| CDX83327 | Canola | nucleus | 32.38 | 32.1 |
| CDX75478 | Canola | nucleus | 26.36 | 32.06 |
| CDX95725 | Canola | nucleus | 32.38 | 32.01 |
| CDY56151 | Canola | nucleus | 18.05 | 31.66 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 28.94 | 31.46 |
| CDY59254 | Canola | nucleus | 22.92 | 31.37 |
| CDX72743 | Canola | nucleus | 26.36 | 31.29 |
| CDY22416 | Canola | nucleus | 26.36 | 31.29 |
| CDY51833 | Canola | nucleus | 17.77 | 31.16 |
| CDY72116 | Canola | nucleus | 25.5 | 31.01 |
| CDY02243 | Canola | nucleus | 25.5 | 31.01 |
| CDY66972 | Canola | nucleus | 17.77 | 31.0 |
| CDY12092 | Canola | nucleus | 26.07 | 29.93 |
| CDX84119 | Canola | nucleus | 22.06 | 29.5 |
| CDX86461 | Canola | nucleus | 18.91 | 29.33 |
| CDY49363 | Canola | nucleus | 21.49 | 28.74 |
| CDY52797 | Canola | nucleus | 21.2 | 28.68 |
| CDY44571 | Canola | nucleus | 19.77 | 27.06 |
| CDY27486 | Canola | plastid | 6.88 | 10.17 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078IJP5 | UniProt:A0A078IJP5 | EnsemblPlants:CDY49609 | ProteinID:CDY49609 |
| ProteinID:CDY49609.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00093458001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF203 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDDCDF | SEG:seg |
Description
BnaA09g03290DBnaA09g03290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJP5]
Coordinates
chrLK032847:+:69979..72893
Molecular Weight (calculated)
39514.7 Da
IEP (calculated)
4.953
GRAVY (calculated)
-0.862
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKI GLKRGRWTAE EDETLTNYIQ INGEGSWRSL PKKAGLLRCG KSCRLRWINY LRMDLKRGNI TAEEDDTIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT SVRRDEHGPN INDFVLNKSS SSSSCSSSGA NNTNKTKKKK GRTSRSSMKK HKQMLTASQC FPQPKELDSE VSEEGHNGNF
201: EGKALEPYEW LDGEIERLMS SFVWECTSEE VVNEVNDYDS GQNKVCESGD NSSCYVRLFE EEHGKLGNLE VDHDMNVEKE REGSGLSSNS NSNENGDKNW
301: WVGLCDSLEV GFGIDDELLG WEFQSSVPCQ SDDLWDLSDF GEIPQGDRI
101: DNEIKNYWNS HLSRKIYAFT SVRRDEHGPN INDFVLNKSS SSSSCSSSGA NNTNKTKKKK GRTSRSSMKK HKQMLTASQC FPQPKELDSE VSEEGHNGNF
201: EGKALEPYEW LDGEIERLMS SFVWECTSEE VVNEVNDYDS GQNKVCESGD NSSCYVRLFE EEHGKLGNLE VDHDMNVEKE REGSGLSSNS NSNENGDKNW
301: WVGLCDSLEV GFGIDDELLG WEFQSSVPCQ SDDLWDLSDF GEIPQGDRI
001: MGRAPCCEKI GLKRGRWTAE EDEILTKYIQ TNGEGSWRSL PKKAGLLRCG KSCRLRWINY LRRDLKRGNI TSDEEEIIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
Arabidopsis Description
MYB111Transcription factor MYB111 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.