Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022602.1-P | Field mustard | nucleus | 98.48 | 98.48 |
| CDY65324 | Canola | nucleus | 96.46 | 94.09 |
| CDY56151 | Canola | nucleus | 82.32 | 81.91 |
| CDY51833 | Canola | nucleus | 80.3 | 79.9 |
| AT5G52600.1 | Thale cress | nucleus | 78.28 | 77.11 |
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 55.56 | 49.33 |
| PGSC0003DMT400079416 | Potato | nucleus | 51.01 | 46.98 |
| Solyc07g008010.2.1 | Tomato | nucleus | 50.0 | 46.92 |
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 52.53 | 46.64 |
| CDY09882 | Canola | nucleus | 39.9 | 39.9 |
| CDX69561 | Canola | nucleus | 39.39 | 39.59 |
| CDX85583 | Canola | nucleus | 39.39 | 39.39 |
| CDX91023 | Canola | nucleus | 39.39 | 39.39 |
| CDY66972 | Canola | nucleus | 37.88 | 37.5 |
| CDX86461 | Canola | nucleus | 38.89 | 34.22 |
| CDX91687 | Canola | nucleus | 37.37 | 32.89 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 39.39 | 32.77 |
| CDY23616 | Canola | nucleus | 37.37 | 32.46 |
| CDY07085 | Canola | nucleus | 40.4 | 31.87 |
| CDY24177 | Canola | nucleus | 39.9 | 31.47 |
| CDX90721 | Canola | nucleus | 35.35 | 31.25 |
| CDY05057 | Canola | nucleus | 35.35 | 30.84 |
| CDY49363 | Canola | nucleus | 39.9 | 30.27 |
| CDX84119 | Canola | nucleus | 39.9 | 30.27 |
| CDY59254 | Canola | nucleus | 37.88 | 29.41 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 40.4 | 29.2 |
| CDY44571 | Canola | nucleus | 37.37 | 29.02 |
| CDY40652 | Canola | nucleus | 39.39 | 28.78 |
| CDX72510 | Canola | nucleus | 39.39 | 28.78 |
| CDX90285 | Canola | nucleus | 40.4 | 28.27 |
| CDY21378 | Canola | nucleus | 37.88 | 27.88 |
| CDY04798 | Canola | nucleus | 37.88 | 27.88 |
| CDX69102 | Canola | nucleus | 39.9 | 27.62 |
| CDX75478 | Canola | nucleus | 39.9 | 27.53 |
| CDY25747 | Canola | nucleus | 36.36 | 27.27 |
| CDY52797 | Canola | nucleus | 35.35 | 27.13 |
| CDY22416 | Canola | nucleus | 39.9 | 26.87 |
| CDX72743 | Canola | nucleus | 39.9 | 26.87 |
| CDY12520 | Canola | nucleus | 36.36 | 26.47 |
| CDY12092 | Canola | nucleus | 40.4 | 26.32 |
| CDY72116 | Canola | nucleus | 37.88 | 26.13 |
| CDY02243 | Canola | nucleus | 37.88 | 26.13 |
| CDY05636 | Canola | nucleus | 33.33 | 22.76 |
| CDY00035 | Canola | nucleus | 34.34 | 20.61 |
| CDX95725 | Canola | nucleus | 35.35 | 19.83 |
| CDX86237 | Canola | nucleus | 34.34 | 19.83 |
| CDX83327 | Canola | nucleus | 34.85 | 19.6 |
| CDX85403 | Canola | nucleus | 33.84 | 19.59 |
| CDY49609 | Canola | nucleus | 33.84 | 19.2 |
| CDY55384 | Canola | nucleus | 27.78 | 18.64 |
| CDX80105 | Canola | nucleus | 27.78 | 16.82 |
| CDY27486 | Canola | plastid | 3.54 | 2.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078GKK4 | UniProt:A0A078GKK4 | EnsemblPlants:CDY27055 | ProteinID:CDY27055 |
| ProteinID:CDY27055.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00036871001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF662 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF4C82 | SEG:seg |
Description
BnaA02g10750DBnaA02g10750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKK4]
Coordinates
chrLK032199:+:243482..244242
Molecular Weight (calculated)
22708.9 Da
IEP (calculated)
9.474
GRAVY (calculated)
-0.920
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKREEGRKT HVKRGLWKPE EDMILRSYID THGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGGM TPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKSSSRK QNATESVEAT PWVDKPVMST EVGGSHGGGE GEEGTTTTWM EETNFFARIE SPQPLTAHYP DTLCFDPSFA FTDCFPLL
101: DNEVKNYWNT HLNKKSSSRK QNATESVEAT PWVDKPVMST EVGGSHGGGE GEEGTTTTWM EETNFFARIE SPQPLTAHYP DTLCFDPSFA FTDCFPLL
001: MECKREEGKS YVKRGLWKPE EDMILKSYVE THGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGSM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
Arabidopsis Description
MYB82Transcription factor MYB82 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTF7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.