Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g02650.t01 | Wine grape | nucleus | 31.86 | 43.64 |
| VIT_04s0008g01870.t01 | Wine grape | nucleus | 37.61 | 43.15 |
| VIT_09s0002g01380.t01 | Wine grape | nucleus | 37.17 | 41.38 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 38.05 | 39.09 |
| VIT_04s0008g01800.t01 | Wine grape | nucleus | 42.48 | 36.23 |
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 35.4 | 35.87 |
| VIT_13s0084g00530.t01 | Wine grape | nucleus | 40.71 | 34.98 |
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 34.51 | 34.98 |
| VIT_14s0066g01220.t01 | Wine grape | nucleus | 33.19 | 34.56 |
| VIT_04s0008g01820.t01 | Wine grape | nucleus | 45.13 | 34.34 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 41.59 | 34.06 |
| VIT_01s0011g04760.t01 | Wine grape | nucleus | 33.63 | 33.78 |
| VIT_14s0006g01620.t01 | Wine grape | nucleus | 34.07 | 33.77 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 44.69 | 33.55 |
| VIT_17s0000g08480.t01 | Wine grape | nucleus | 31.86 | 33.33 |
| VIT_17s0000g02660.t01 | Wine grape | nucleus | 33.63 | 33.19 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 41.15 | 32.75 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 40.27 | 32.27 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 37.17 | 31.82 |
| KRH47594 | Soybean | nucleus | 38.5 | 31.75 |
| KRH06177 | Soybean | nucleus | 38.94 | 30.88 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 36.28 | 30.48 |
| VIT_01s0127g00730.t01 | Wine grape | nucleus | 29.65 | 30.45 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 38.05 | 30.07 |
| VIT_18s0117g00200.t01 | Wine grape | nucleus | 30.97 | 30.04 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 33.19 | 29.88 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 31.86 | 29.75 |
| VIT_09s0002g01400.t01 | Wine grape | nucleus | 44.25 | 29.15 |
| VIT_18s0117g00210.t01 | Wine grape | nucleus | 33.19 | 29.07 |
| Solyc12g049300.1.1 | Tomato | nucleus | 42.92 | 27.56 |
| VIT_09s0002g01410.t01 | Wine grape | nucleus | 35.4 | 27.03 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 32.74 | 25.52 |
| VIT_08s0007g07230.t01 | Wine grape | nucleus | 35.4 | 25.0 |
| VIT_06s0004g00570.t01 | Wine grape | nucleus, plastid | 34.07 | 24.68 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 37.61 | 23.55 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 33.63 | 20.71 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 32.74 | 19.32 |
| PGSC0003DMT400030322 | Potato | nucleus | 3.1 | 4.27 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100261180 | wikigene:100261180 | MapMan:15.5.2.1 | UniProt:A5AEM6 | EMBL:AM424675 |
| ProteinID:CAN60141 | ProteinID:CAN60141.1 | ProteinID:CBI20717 | ProteinID:CBI20717.3 | EMBL:FN595231 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EntrezGene:LOC100261180 | wikigene:LOC100261180 | InterPro:Myb_dom |
| PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF459 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000151E80F | ArrayExpress:VIT_04s0008g01840 | EnsemblPlantsGene:VIT_04s0008g01840 | EnsemblPlants:VIT_04s0008g01840.t01 | RefSeq:XP_002279918 |
| RefSeq:XP_002279918.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:1467631..1468488
Molecular Weight (calculated)
26010.1 Da
IEP (calculated)
6.053
GRAVY (calculated)
-1.097
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSHPCTRR SNRGAWTALE DKLLRDYVKT HGPGKWRNVS QETGLERSGK SCRLRWLNYL RPDIKRGNIS PEEEDLIIRL HKLLGNRWSL IAGRLPGRSD
101: NEIKNYWNTT LAKRVVHGQN SNQSKDDRKE KEKEPSNMDE APMEMKGSEG PDPVNDFKED YSPNPAMDFS GKLFQYNDTD YDQLWNFSDF DDGRWGCGNM
201: GGANGLCQWS DFPSASAEEA EIFFHS
101: NEIKNYWNTT LAKRVVHGQN SNQSKDDRKE KEKEPSNMDE APMEMKGSEG PDPVNDFKED YSPNPAMDFS GKLFQYNDTD YDQLWNFSDF DDGRWGCGNM
201: GGANGLCQWS DFPSASAEEA EIFFHS
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.