Factsheet for VIT_01s0127g00730.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g08480.t01	Wine grape	nucleus	51.82	52.78
VIT_14s0066g01220.t01	Wine grape	nucleus	47.73	48.39
VIT_17s0000g02650.t01	Wine grape	nucleus	33.18	44.24
VIT_04s0008g01870.t01	Wine grape	nucleus	31.82	35.53
VIT_09s0002g01380.t01	Wine grape	nucleus	32.27	34.98
VIT_14s0006g01620.t01	Wine grape	nucleus	35.0	33.77
VIT_17s0000g02660.t01	Wine grape	nucleus	35.0	33.62
VIT_01s0011g04760.t01	Wine grape	nucleus	34.09	33.33
VIT_11s0016g05660.t01	Wine grape	nucleus	31.82	31.39
VIT_11s0016g05690.t01	Wine grape	nucleus	30.91	30.49
GSMUA_Achr3P07950_001	Banana	nucleus	32.73	30.25
VIT_18s0117g00200.t01	Wine grape	nucleus	31.82	30.04
VIT_11s0016g01310.t01	Wine grape	nucleus	30.0	30.0
VIT_04s0023g03710.t01	Wine grape	nucleus	32.73	29.75
VIT_04s0008g01840.t01	Wine grape	nucleus	30.45	29.65
VIT_18s0117g00210.t01	Wine grape	nucleus	34.09	29.07
VIT_03s0038g02310.t01	Wine grape	nucleus	32.27	28.29
GSMUA_Achr3P27700_001	Banana	nucleus	35.0	28.1
VIT_04s0008g01800.t01	Wine grape	nucleus	32.27	26.79
VIT_13s0084g00530.t01	Wine grape	nucleus	31.82	26.62
VIT_15s0046g00170.t01	Wine grape	nucleus	33.64	25.87
VIT_08s0007g07230.t01	Wine grape	nucleus	37.27	25.62
VIT_04s0008g01810.t01	Wine grape	nucleus	31.82	25.36
VIT_06s0004g00570.t01	Wine grape	nucleus, plastid	35.91	25.32
VIT_04s0008g01820.t01	Wine grape	nucleus	33.64	24.92
VIT_07s0130g00040.t01	Wine grape	nucleus	32.73	24.83
VIT_09s0002g01410.t01	Wine grape	nucleus	33.18	24.66
VIT_04s0008g01830.t01	Wine grape	nucleus	31.36	24.47
VIT_11s0016g01320.t01	Wine grape	nucleus	31.36	24.3
VIT_11s0016g01300.t01	Wine grape	nucleus	32.27	23.59
VIT_09s0002g01400.t01	Wine grape	nucleus	31.36	20.12
VIT_07s0005g01210.t01	Wine grape	nucleus	30.91	18.53
VIT_05s0077g01360.t01	Wine grape	nucleus	31.36	18.02

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100852592	wikigene:100852592	MapMan:15.5.2.1	ProteinID:CBI28523	ProteinID:CBI28523.3
UniProt:D7TDF0	EMBL:FN595761	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
EntrezGene:LOC100852592	wikigene:LOC100852592	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF675	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGR:TC69897	UniParc:UPI00015CC9CB
ArrayExpress:VIT_01s0127g00730	EnsemblPlantsGene:VIT_01s0127g00730	EnsemblPlants:VIT_01s0127g00730.t01	unigene:Vvi.19356	RefSeq:XP_003631256	RefSeq:XP_003631256.1

Description

No Description!

Coordinates

chr1:-:8079671..8080776

Molecular Weight (calculated)

25267.1 Da

IEP (calculated)

9.897

GRAVY (calculated)

-0.761

Length

220 amino acids

Sequence
(BLAST)

001: MKGEDNYKKG LWTKEEDRIL LDYIQVHGRG RWNRISKITG LKRYGKSCRL RWMNYLSPSV KHGEFTEQEE DLIIRLHNLL GNRWSLIAGR VPGRTDNQVK
101: NHWNSHLCKR LGIKKKNRKT AVTSLKPHST NVDNTPKRQA LVDSISKPFH DNNMDVGGVT RRQCPLSGAQ VSEEQPAEVG WHCVDSLWAS TAEHLRVCTP
201: TSIEFLEGYY SPGDAFWQGL

Best Arabidopsis Sequence Match ( AT5G14750.1 )
(BLAST)

001: MRKKVSSSGD EGNNEYKKGL WTVEEDKILM DYVKAHGKGH WNRIAKKTGL KRCGKSCRLR WMNYLSPNVK RGNFTEQEED LIIRLHKLLG NRWSLIAKRV
101: PGRTDNQVKN YWNTHLSKKL GIKDQKTKQS NGDIVYQINL PNPTETSEET KISNIVDNNN ILGDEIQEDH QGSNYLSSLW VHEDEFELST LTNMMDFIDG
201: HCF

Arabidopsis Description

WERWER1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJM1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.