Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 40.68 | 80.54 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 43.05 | 72.57 |
| TraesCS4A01G217800.1 | Wheat | nucleus | 70.85 | 72.57 |
| TraesCS4D01G092900.1 | Wheat | nucleus | 70.85 | 72.32 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 43.39 | 64.32 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 45.76 | 64.29 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 47.12 | 64.06 |
| Zm00001d053060_P001 | Maize | nucleus | 59.66 | 61.11 |
| GSMUA_Achr10P... | Banana | nucleus | 44.75 | 60.83 |
| Zm00001d004744_P001 | Maize | nucleus | 56.61 | 60.73 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 41.02 | 60.5 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 47.8 | 59.49 |
| Os05t0429900-01 | Rice | nucleus | 51.19 | 58.08 |
| HORVU4Hr1G018360.2 | Barley | nucleus | 70.85 | 57.26 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 46.1 | 56.43 |
| Os09t0538400-01 | Rice | extracellular | 47.8 | 56.18 |
| OQU83016 | Sorghum | nucleus | 59.32 | 55.56 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 71.53 | 55.38 |
| AT1G35515.1 | Thale cress | nucleus | 39.32 | 54.72 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 49.83 | 54.04 |
| Bra000680.1-P | Field mustard | nucleus | 40.0 | 52.68 |
| CDX90721 | Canola | nucleus | 40.0 | 52.68 |
| CDY05057 | Canola | nucleus | 39.66 | 51.54 |
| AT4G09460.1 | Thale cress | nucleus | 40.68 | 50.85 |
| Solyc06g065100.2.1 | Tomato | nucleus | 47.8 | 50.54 |
| Os01t0874300-01 | Rice | extracellular, nucleus | 49.15 | 50.52 |
| PGSC0003DMT400080427 | Potato | nucleus | 47.8 | 49.47 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 47.12 | 48.6 |
| KRH63931 | Soybean | nucleus | 48.81 | 47.68 |
| KRH54016 | Soybean | nucleus | 48.47 | 47.51 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 45.42 | 46.21 |
| Os01t0695900-01 | Rice | nucleus | 29.49 | 31.64 |
| Os01t0305900-01 | Rice | nucleus | 30.17 | 28.08 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:4349938 | UniProt:B9G9P9 | ProteinID:BAT12944.1 | ProteinID:EEE51755.1 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | EnsemblPlantsGene:Os11g0180900 | EnsemblPlants:Os11t0180900-00 |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF951 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00005B0D7B | RefSeq:XP_015615594.1 | SEG:seg | : | : |
Description
Myb transcription factor domain containing protein. (Os11t0180900-00)
Coordinates
chr11:+:4049330..4050752
Molecular Weight (calculated)
32323.0 Da
IEP (calculated)
7.983
GRAVY (calculated)
-0.687
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDQRLIAYIK ANGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDEFIIK LHELLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLARG VDPQTHRPLN AAADHHQQQQ LQAPRRFAAA PAGHHHHHPD HFAVLSNSPE ACSHSSDDEP SSATPPPPPR HLGIDLNLSI
201: SLAPYQPQDQ TSEPMKQEED DEASATANGA GNAAMTTTAT TAAVCLCLNR LGLHGGEVCS CGRGGAPSMQ ASTHMFRFIT PLGGSHHNSS STTMT
101: DNEIKNYWNT HIKRKLLARG VDPQTHRPLN AAADHHQQQQ LQAPRRFAAA PAGHHHHHPD HFAVLSNSPE ACSHSSDDEP SSATPPPPPR HLGIDLNLSI
201: SLAPYQPQDQ TSEPMKQEED DEASATANGA GNAAMTTTAT TAAVCLCLNR LGLHGGEVCS CGRGGAPSMQ ASTHMFRFIT PLGGSHHNSS STTMT
001: MGRSPCCEKA HTNKGAWTKE EDERLVAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
Arabidopsis Description
MYB4Transcription repressor MYB4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.