Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001917.1-P
Bra004162.1-P
Bra004473.1-P
Bra004539.1-P
Bra007957.1-P
Bra008740.1-P
Bra009770.1-P
Bra016164.1-P
Bra021389.1-P
Bra023486.1-P
Bra025311.1-P
Bra025589.1-P
Bra027423.1-P
Bra027653.1-P
Bra027796.1-P
Bra029411.1-P
Bra032635.1-P
Bra039065.1-P
Bra039395.1-P
Bra039763.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63650.1 Bra032635.1-P AT1G01380.1 15361138
AT1G63650.1 Bra001917.1-P AT1G56650.1 12917293
AT1G63650.1 Bra004162.1-P AT1G56650.1 12917293
AT1G63650.1 Bra039763.1-P AT1G56650.1 12917293
AT1G63650.1 Bra001917.1-P AT1G56650.1 15361138
AT1G63650.1 Bra004162.1-P AT1G56650.1 15361138
AT1G63650.1 Bra039763.1-P AT1G56650.1 15361138
AT1G63650.1 Bra027653.1-P AT1G63650.1 12917293
AT1G63650.1 Bra027796.1-P AT1G63650.1 12917293
AT1G63650.1 Bra001917.1-P AT1G66370.1 15361138
AT1G63650.1 Bra004162.1-P AT1G66370.1 15361138
AT1G63650.1 Bra039763.1-P AT1G66370.1 15361138
AT1G63650.1 Bra001917.1-P AT1G66380.1 15361138
AT1G63650.1 Bra004162.1-P AT1G66380.1 15361138
AT1G63650.1 Bra039763.1-P AT1G66380.1 15361138
AT1G63650.1 Bra001917.1-P AT1G66390.1 12917293
AT1G63650.1 Bra004162.1-P AT1G66390.1 12917293
AT1G63650.1 Bra039763.1-P AT1G66390.1 12917293
AT1G63650.1 Bra001917.1-P AT1G66390.1 15361138
AT1G63650.1 Bra004162.1-P AT1G66390.1 15361138
AT1G63650.1 Bra039763.1-P AT1G66390.1 15361138
AT1G63650.1 Bra007957.1-P AT1G71030.1 15361138
AT1G63650.1 Bra016164.1-P AT1G71030.1 15361138
AT1G63650.1 Bra004539.1-P AT2G46410.1 12917293
AT1G63650.1 Bra004539.1-P AT2G46410.1 14627722
AT1G63650.1 Bra004539.1-P AT2G46410.1 15361138
AT1G63650.1 Bra004473.1-P AT2G47190.1 12056412
AT1G63650.1 Bra021389.1-P AT2G47190.1 12056412
AT1G63650.1 Bra027423.1-P AT3G13540.1 15361138
AT1G63650.1 Bra039395.1-P AT3G13540.1 15361138
AT1G63650.1 Bra025311.1-P AT3G27920.1 12917293
AT1G63650.1 Bra039065.1-P AT3G27920.1 12917293
AT1G63650.1 Bra025311.1-P AT3G27920.1 15361138
AT1G63650.1 Bra039065.1-P AT3G27920.1 15361138
AT1G63650.1 Bra008740.1-P AT5G14750.1 14627722
AT1G63650.1 Bra023486.1-P AT5G14750.1 14627722
AT1G63650.1 Bra008740.1-P AT5G14750.1 15361138
AT1G63650.1 Bra023486.1-P AT5G14750.1 15361138
AT1G63650.1 Bra008740.1-P AT5G14750.1 17644729
AT1G63650.1 Bra023486.1-P AT5G14750.1 17644729
AT1G63650.1 Bra009770.1-P AT5G24520.1 12917293
AT1G63650.1 Bra029411.1-P AT5G24520.1 12917293
AT1G63650.1 Bra025589.1-P AT5G40330.1 15361138
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72121 Canola nucleus 50.83 100.0
Bra027653.1-P Field mustard nucleus 86.96 88.42
AT1G63650.1 Thale cress nucleus 85.97 87.42
Bra025508.1-P Field mustard nucleus 71.62 69.0
VIT_02s0025g03450.t01 Wine grape nucleus 50.0 48.25
GSMUA_Achr11P... Banana nucleus 36.8 47.35
Os04t0557500-00 Rice mitochondrion, plasma membrane 13.53 45.56
Solyc08g081140.2.1 Tomato nucleus 44.06 42.65
GSMUA_Achr8P11430_001 Banana nucleus 38.28 42.49
GSMUA_Achr11P... Banana nucleus 39.44 40.3
GSMUA_Achr11P... Banana nucleus 36.63 40.22
GSMUA_Achr5P20600_001 Banana nucleus 35.64 36.73
PGSC0003DMT400032140 Potato nucleus 21.12 35.56
HORVU2Hr1G096810.5 Barley nucleus 32.84 35.47
TraesCSU01G116000.1 Wheat nucleus 26.57 35.31
TraesCS2A01G409600.2 Wheat nucleus, plastid 31.68 34.41
TraesCS2D01G406900.1 Wheat nucleus 31.85 34.04
TraesCS2B01G428000.1 Wheat nucleus 32.18 34.03
TraesCS2A01G409400.1 Wheat nucleus 31.68 33.8
Os04t0557200-01 Rice cytosol, nucleus, peroxisome 31.02 33.63
TraesCSU01G029400.1 Wheat nucleus 31.35 33.22
TraesCS4B01G397400.1 Wheat nucleus 30.69 32.98
Os01t0577300-00 Rice cytosol 6.6 32.79
Os04t0557800-00 Rice mitochondrion 31.02 32.75
OQU82120 Sorghum nucleus 31.52 32.48
OQU82117 Sorghum nucleus 31.52 32.37
Zm00001d000236_P001 Maize nucleus, plastid 29.7 32.32
TraesCS5A01G489500.1 Wheat nucleus 30.2 32.11
OQU81560 Sorghum nucleus 30.69 31.58
TraesCS2D01G406800.1 Wheat plastid 24.09 31.4
TraesCS4B01G397800.1 Wheat nucleus 26.4 31.37
TraesCS5A01G558500.1 Wheat nucleus 30.03 31.11
Zm00001d026147_P002 Maize nucleus 31.52 31.01
TraesCS2D01G575600.3 Wheat nucleus, plastid 30.03 30.9
TraesCS4D01G224600.1 Wheat nucleus 27.89 30.34
Bra037887.1-P Field mustard nucleus 23.76 28.97
Bra000970.1-P Field mustard nucleus 30.2 27.98
TraesCS4B01G397300.1 Wheat nucleus 17.49 26.04
TraesCSU01G237100.1 Wheat nucleus 15.35 25.34
TraesCSU01G228400.1 Wheat nucleus 15.35 25.34
Bra037343.1-P Field mustard cytosol 29.21 24.89
Bra024993.1-P Field mustard nucleus 15.02 24.14
OQU82119 Sorghum nucleus 21.12 23.44
Os01t0576100-00 Rice nucleus 12.05 23.25
Bra017527.1-P Field mustard nucleus 8.42 22.57
Bra004532.1-P Field mustard nucleus 17.99 22.43
Bra039279.1-P Field mustard nucleus 16.83 22.22
Bra038458.1-P Field mustard nucleus 15.84 21.29
Bra012720.1-P Field mustard nucleus 15.68 20.83
Os11t0258700-00 Rice mitochondrion 16.34 20.5
Bra017520.1-P Field mustard nucleus 16.67 20.28
Bra017523.1-P Field mustard nucleus 16.34 19.53
Bra013264.1-P Field mustard nucleus 9.41 19.19
Bra024998.1-P Field mustard nucleus 18.32 19.14
Bra013128.1-P Field mustard nucleus 8.25 18.73
Bra033273.1-P Field mustard nucleus 17.99 18.66
Bra013263.1-P Field mustard nucleus 8.25 18.45
Bra024992.1-P Field mustard nucleus 8.09 18.08
Bra010178.1-P Field mustard nucleus 17.66 17.83
Bra039924.1-P Field mustard nucleus 8.75 16.93
Bra030208.1-P Field mustard nucleus 8.25 16.45
Bra011790.1-P Field mustard nucleus 9.08 16.37
Bra010617.1-P Field mustard nucleus 8.91 16.17
Bra030210.1-P Field mustard nucleus 8.42 15.84
Bra039926.1-P Field mustard nucleus 7.43 15.52
Bra030207.1-P Field mustard nucleus 7.76 14.42
Bra039927.1-P Field mustard nucleus 7.43 14.24
Protein Annotations
MapMan:15.5.32Gene3D:4.10.280.10EnsemblPlantsGene:Bra027796EnsemblPlants:Bra027796.1EnsemblPlants:Bra027796.1-Pncoils:Coil
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598
InterPro:IPR036638UniProt:M4EG82InterPro:MYC/MYB_NPFAM:PF00010PFAM:PF14215PFscan:PS50888
PANTHER:PTHR11514PANTHER:PTHR11514:SF38SMART:SM00353SUPFAM:SSF47459UniParc:UPI0002541A7EInterPro:bHLH_dom
Description
AT1G63650 (E=8e-300) EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF GLABRA 3); DNA binding / transcription factor
Coordinates
chrA09:+:6104239..6107925
Molecular Weight (calculated)
67772.8 Da
IEP (calculated)
4.926
GRAVY (calculated)
-0.426
Length
606 amino acids
Sequence
(BLAST)
001: MATGENRTVQ ENLKKHLAVS VRNIQWSYGI FWSISASQPG VLEWGDGYYN GDIKTRKTIQ AVEVKADQLG LERSEQLREL YESLSVAESS ASGGSQVSRR
101: ASATALSPED LTDTEWYYLV CMSFVFNIGE GITGGALGNG EPIWLCNAHT ADSKVFTRSL LAKSASLLTV VCFPFLGGVL EIGTTEHITE DFNVIQCVKT
201: LFLEAHPYGT ISTRSDYQEI FDPLNSDKYI PTFGTEAFPT TSTSVFEQEL EDHDSFINGG GASQVQSWQF VGEELNNCVH QPVNSSDCVS QTFVGGTTGR
301: VSCNPRKSRP QRLGQIQEQS NRLNMDDDVH YQGVISTIFK TAHQLVLGPQ FQNFDKRSSF TRWRRLSLSA KTLGEKSQSM LKKIVFEVPR MHQKELLLPD
401: TPEDNMFKIG DETGNHALSE RKRREKLNDR FMTLRSIIPS ISKIDKVSIL DDTIDYLQEL QRRVQELESC REYTDTEMQM PMKRKKPEDD DERASANCLN
501: TKRKESDVNV GEDEPADDTG YAGLTDNLSI GSFGNEVVIE LRCAWREGIL LEIMDVISHL NLDSHSVQSS TGDGLLCLTV NCKHKGTNIA TAGMIQEALQ
601: RVAWIC
Best Arabidopsis Sequence Match ( AT1G63650.3 )
(BLAST)
001: MATGENRTVP DNLKKQLAVS VRNIQWSYGI FWSVSASQPG VLEWGDGYYN GDIKTRKTIQ AAEVKIDQLG LERSEQLREL YESLSLAESS ASGSSQVTRR
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
Arabidopsis Description
BHLH2EGL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1W8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.