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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G409400.1
TraesCS2A01G409600.2
TraesCS2B01G428000.1
TraesCS2D01G406800.1
TraesCS2D01G406900.1
TraesCS2D01G575600.3
TraesCS3A01G046800.1
TraesCS3A01G257800.1
TraesCS3B01G036000.1
TraesCS3B01G290600.1
TraesCS3D01G033100.1
TraesCS3D01G257800.1
TraesCS4B01G397300.1
TraesCS4B01G397400.1
TraesCS4B01G397800.1
TraesCS4D01G224600.1
TraesCS5A01G489500.1
TraesCS5A01G558500.1
TraesCS6A01G259400.1
TraesCS6B01G286700.1
TraesCSU01G029400.1
TraesCSU01G116000.1
TraesCSU01G228400.1
TraesCSU01G237100.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63650.1 TraesCS2A01G409400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2A01G409600.2 AT1G63650.1 12917293
AT1G63650.1 TraesCS2B01G428000.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G406800.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G406900.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G575600.3 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397300.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397800.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4D01G224600.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS5A01G489500.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS5A01G558500.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G029400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G116000.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G228400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G237100.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS3A01G046800.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3B01G036000.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3D01G033100.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3A01G257800.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS3B01G290600.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS3D01G257800.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS6A01G259400.1 AT5G24520.1 12917293
AT1G63650.1 TraesCS6B01G286700.1 AT5G24520.1 12917293
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G406900.1 Wheat nucleus 83.87 68.78
TraesCS2A01G409600.2 Wheat nucleus, plastid 80.22 66.85
HORVU2Hr1G096810.5 Barley nucleus 78.71 65.24
Zm00001d000236_P001 Maize nucleus, plastid 56.77 47.4
TraesCS2D01G575600.3 Wheat nucleus, plastid 59.35 46.86
TraesCS4D01G224600.1 Wheat nucleus 54.62 45.6
OQU81560 Sorghum nucleus 57.42 45.33
OQU82120 Sorghum nucleus 56.34 44.56
OQU82117 Sorghum nucleus 55.91 44.07
Zm00001d026147_P002 Maize nucleus 56.13 42.37
Os01t0577300-00 Rice cytosol 10.97 41.8
GSMUA_Achr11P... Banana nucleus 36.13 35.67
OQU82119 Sorghum nucleus 40.0 34.07
TraesCS1D01G094000.1 Wheat cytosol, mitochondrion, nucleus, plastid 14.62 34.0
GSMUA_Achr8P11430_001 Banana nucleus 37.85 32.23
Os01t0576100-00 Rice nucleus 21.08 31.21
GSMUA_Achr11P... Banana nucleus 35.91 30.25
GSMUA_Achr11P... Banana nucleus 36.99 29.01
VIT_02s0025g03450.t01 Wine grape nucleus 39.14 28.98
GSMUA_Achr5P20600_001 Banana nucleus 35.7 28.23
VIT_15s0046g02560.t01 Wine grape nucleus 37.42 26.4
Solyc08g081140.2.1 Tomato nucleus 35.05 26.04
KRH41187 Soybean nucleus 35.27 26.03
KRH59908 Soybean nucleus 34.41 25.36
AT1G63650.1 Thale cress nucleus 32.26 25.17
Bra025508.1-P Field mustard nucleus 33.55 24.8
Bra027653.1-P Field mustard nucleus 30.97 24.16
Bra027796.1-P Field mustard nucleus 31.4 24.09
AT5G41315.2 Thale cress nucleus 32.9 23.72
KRH65046 Soybean nucleus 32.9 23.65
KRH48144 Soybean nucleus 32.9 23.54
AT4G00480.2 Thale cress nucleus 25.81 20.69
CDX77694 Canola nucleus 11.18 20.55
Bra000970.1-P Field mustard nucleus 26.67 18.96
TraesCS1D01G094200.1 Wheat nucleus 24.52 18.07
TraesCS3D01G253700.1 Wheat nucleus 17.63 17.63
PGSC0003DMT400032140 Potato nucleus 13.33 17.22
Bra037343.1-P Field mustard cytosol 24.09 15.75
TraesCS4D01G275500.1 Wheat nucleus 20.0 15.55
TraesCS3D01G166300.2 Wheat nucleus 20.43 15.2
TraesCS1D01G374800.1 Wheat nucleus 8.17 14.34
TraesCS4D01G235900.1 Wheat nucleus 9.89 14.29
TraesCS5D01G313700.1 Wheat nucleus 8.39 14.18
TraesCS5D01G313400.1 Wheat nucleus 8.17 13.92
TraesCS1D01G196900.1 Wheat nucleus 20.22 13.53
TraesCS4D01G306400.1 Wheat nucleus 4.73 13.33
TraesCS4D01G330500.1 Wheat nucleus 9.03 13.29
TraesCS5D01G313500.1 Wheat nucleus 7.53 12.54
TraesCS7D01G102200.1 Wheat nucleus 6.88 12.5
TraesCS5D01G313600.1 Wheat nucleus 7.31 12.19
TraesCS4D01G056900.2 Wheat nucleus 9.46 11.73
TraesCS4D01G019100.1 Wheat nucleus 8.82 11.26
TraesCS4D01G018800.2 Wheat nucleus 8.6 11.05
TraesCS5D01G020600.1 Wheat nucleus 8.82 10.96
TraesCS4D01G019200.1 Wheat nucleus 8.39 10.83
TraesCS4D01G018700.1 Wheat nucleus 8.39 10.8
TraesCS5D01G517900.1 Wheat nucleus 7.53 10.8
TraesCS4D01G306300.1 Wheat nucleus 7.74 10.56
TraesCS3D01G014900.1 Wheat nucleus 7.53 10.42
Protein Annotations
EnsemblPlants:TraesCS2D01G406800.1EnsemblPlantsGene:TraesCS2D01G406800Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:MYC/MYB_NInterPro:bHLH_dom
PANTHER:PTHR11514PANTHER:PTHR11514:SF94PFAM:PF00010PFAM:PF14215PFscan:PS50888SUPFAM:SSF47459
TIGR:cd00083MapMan:15.5.32::::
Description
No Description!
Coordinates
chr2D:+:522323574..522329854
Molecular Weight (calculated)
51529.3 Da
IEP (calculated)
4.698
GRAVY (calculated)
-0.229
Length
465 amino acids
Sequence
(BLAST)
001: MALPIVHPSQ GEPTLLPPAG KQFSNQLAAA VRSINWSYAI FWSISASRPG VLTWKDGFYN GEIKTRKVTS SADLTPDQLV LQRSEQLREL YESLLSGQCD
101: HRARRPAAAL SPEDLGDAEW YYIVCMGYAF RPGQGLPGRS FASNEHVWLC NAPCADTKTF QRALLAKVLE DRDMLNWINT SFWDLQFTTC SKSEEPNSNP
201: SADDAGEADI VFEDLDRNTM AVVIPGELEL GQVEFMSDST KEINEFYGLC DELDVEALEE NWIMGGSFEL IVLCGLEEIM GLGRSVAAPV DGESQKLLKK
301: ALASGAWANN GGDDTARAQE SINTKNHVIS ERRRREKLNE MFLILKSLVP SIHKGLEHKV EELESNRAAG IAVRKCHEVP GKKVLAGSKR KAPEVGGDDA
401: ERVLTKDDGL SSVVNVTVTD KEVLLEVQCQ WKELLMTQVF DAIKSLCLDV LSVRAVRVVI MVYDF
Best Arabidopsis Sequence Match ( AT1G63650.1 )
(BLAST)
001: MATGENRTVP DNLKKQLAVS VRNIQWSYGI FWSVSASQPG VLEWGDGYYN GDIKTRKTIQ AAEVKIDQLG LERSEQLREL YESLSLAESS ASGSSQVTRR
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
Arabidopsis Description
BHLH2EGL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1W8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.