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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:mitochondrion, nucleus, plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G409400.1
TraesCS2A01G409600.2
TraesCS2B01G428000.1
TraesCS2D01G406800.1
TraesCS2D01G406900.1
TraesCS2D01G575600.3
TraesCS3A01G046800.1
TraesCS3A01G257800.1
TraesCS3B01G036000.1
TraesCS3B01G290600.1
TraesCS3D01G033100.1
TraesCS3D01G257800.1
TraesCS4B01G397300.1
TraesCS4B01G397400.1
TraesCS4B01G397800.1
TraesCS4D01G224600.1
TraesCS5A01G489500.1
TraesCS5A01G558500.1
TraesCS6A01G259400.1
TraesCS6B01G286700.1
TraesCSU01G029400.1
TraesCSU01G116000.1
TraesCSU01G228400.1
TraesCSU01G237100.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63650.1 TraesCS2A01G409400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2A01G409600.2 AT1G63650.1 12917293
AT1G63650.1 TraesCS2B01G428000.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G406800.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G406900.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G575600.3 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397300.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397800.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4D01G224600.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS5A01G489500.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS5A01G558500.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G029400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G116000.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G228400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G237100.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS3A01G046800.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3B01G036000.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3D01G033100.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3A01G257800.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS3B01G290600.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS3D01G257800.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS6A01G259400.1 AT5G24520.1 12917293
AT1G63650.1 TraesCS6B01G286700.1 AT5G24520.1 12917293
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G409400.1 Wheat nucleus 88.35 86.8
HORVU2Hr1G096810.5 Barley nucleus 84.23 83.78
TraesCS2D01G406800.1 Wheat plastid 66.85 80.22
TraesCS5A01G489500.1 Wheat nucleus 65.59 64.21
TraesCS5A01G558500.1 Wheat nucleus 65.23 62.22
OQU82117 Sorghum nucleus 58.42 55.25
OQU81560 Sorghum nucleus 57.53 54.5
Zm00001d000236_P001 Maize nucleus, plastid 53.94 54.04
OQU82120 Sorghum nucleus 56.81 53.91
Os01t0577300-00 Rice cytosol 11.65 53.28
Zm00001d026147_P002 Maize nucleus 58.06 52.6
GSMUA_Achr11P... Banana nucleus 38.71 45.86
OQU82119 Sorghum nucleus 44.44 45.42
Os01t0576100-00 Rice nucleus 24.37 43.31
GSMUA_Achr8P11430_001 Banana nucleus 40.32 41.21
GSMUA_Achr11P... Banana nucleus 38.53 38.95
GSMUA_Achr11P... Banana nucleus 39.25 36.93
GSMUA_Achr5P20600_001 Banana nucleus 38.35 36.39
VIT_02s0025g03450.t01 Wine grape nucleus 40.14 35.67
AT1G63650.1 Thale cress nucleus 35.66 33.39
Solyc08g081140.2.1 Tomato nucleus 37.1 33.07
KRH41187 Soybean nucleus 36.74 32.54
VIT_15s0046g02560.t01 Wine grape nucleus 38.17 32.32
Bra025508.1-P Field mustard nucleus 36.38 32.27
KRH59908 Soybean nucleus 36.2 32.01
Bra027796.1-P Field mustard nucleus 34.41 31.68
Bra027653.1-P Field mustard nucleus 33.51 31.38
AT5G41315.2 Thale cress nucleus 35.84 31.01
KRH65046 Soybean nucleus 35.13 30.29
KRH48144 Soybean nucleus 34.95 30.0
AT4G00480.2 Thale cress nucleus 29.21 28.1
TraesCS1A01G102400.2 Wheat nucleus, vacuole 30.47 27.16
CDX77694 Canola nucleus 11.65 25.69
PGSC0003DMT400032140 Potato nucleus 16.31 25.28
Bra000970.1-P Field mustard nucleus 29.03 24.77
TraesCS3A01G252900.1 Wheat nucleus 19.18 23.31
TraesCS1A01G369200.1 Wheat nucleus 7.53 21.21
Bra037343.1-P Field mustard cytosol 26.88 21.1
TraesCS2A01G448500.1 Wheat nucleus 9.5 20.7
TraesCS5A01G306600.1 Wheat nucleus 9.5 19.27
TraesCS4A01G028900.1 Wheat nucleus 20.43 19.1
TraesCS5A01G306700.1 Wheat peroxisome 9.32 18.98
TraesCS5A01G505100.1 Wheat nucleus 10.04 18.73
TraesCS3A01G158600.1 Wheat nucleus 20.25 18.34
TraesCS5A01G306200.1 Wheat nucleus 9.14 18.28
TraesCS4A01G059100.1 Wheat nucleus 10.39 17.47
TraesCS5A01G306500.1 Wheat nucleus 8.78 17.44
TraesCS5A01G306400.1 Wheat nucleus 6.81 17.04
TraesCS1A01G193200.1 Wheat nucleus 20.79 16.74
TraesCS5A01G555200.1 Wheat nucleus 9.14 16.4
TraesCS5A01G555300.1 Wheat nucleus 7.17 16.33
TraesCS7A01G558700.1 Wheat nucleus 9.32 16.2
TraesCS4A01G354100.1 Wheat nucleus 8.96 15.38
TraesCS4A01G292700.1 Wheat nucleus 9.86 15.32
TraesCS5A01G014800.1 Wheat nucleus 10.39 14.76
TraesCS4A01G257900.2 Wheat nucleus 9.86 14.59
TraesCS4A01G408700.1 Wheat nucleus 6.99 14.44
TraesCS3A01G019000.1 Wheat nucleus 8.06 14.11
TraesCS4A01G292800.1 Wheat nucleus 8.96 13.59
TraesCS3A01G019100.1 Wheat nucleus 7.71 13.52
TraesCS4A01G408800.1 Wheat nucleus 8.96 13.02
Protein Annotations
EnsemblPlants:TraesCS2A01G409600.2EnsemblPlantsGene:TraesCS2A01G409600Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:MYC/MYB_NInterPro:bHLH_dom
ncoils:CoilPANTHER:PTHR11514PANTHER:PTHR11514:SF94PFAM:PF00010PFAM:PF14215PFscan:PS50888
SEG:segSMART:SM00353SUPFAM:SSF47459TIGR:cd00083MapMan:15.5.32:
Description
No Description!
Coordinates
chr2A:+:667647129..667652609
Molecular Weight (calculated)
60826.5 Da
IEP (calculated)
5.447
GRAVY (calculated)
-0.244
Length
558 amino acids
Sequence
(BLAST)
001: MALPVIRPSQ EEPTLPPPAR KQFSNQLAAA VRSINWSYAI FWSISTSRPG VLTWKDGFYN GEIKTRKVTS SADLTADQLV LQRSEQLREL YESLLCGQCD
101: HRARRPAAAL SPEDLGDAEW YYTVCMSYAF RPGQGLPGRS FAGNEHVWLC NAQCADTKTF QRALLAKTAS IQTVACIPLM GGVLELGTTD TVLEDMGMVN
201: PIRTSFWDLK FPTCSKSEEP NSSPSVDDTG DADIVFDVLN HDTMATMITG ELEPGEVECL SDGNLERITK EINGFCGLCD ELDVGALEEN WIMGGSFEVM
301: SSPEAPPAPV ATDGVTSGAV AFSSIGPSHP SCFAAWKRSW HSAEDVVVPV TGSQKLLKKA LAGGAWANNG DDGTARAQES TNTKNHVISE RRRREKLNEM
401: FLILKSLVPS IHKVDKASIL AETIAYLREL EQKVEELESN KAAGTTVVRK RHEVGGKKVL AGSKRKASEL GGEDGPSNIV NVTVTDKEVL LEVQCRWKEL
501: LMTQVFDAIK SLRLDVLSVR ASTPDGLLAL KIRAQFAGPG AVEPGMISEA LQKAIRRR
Best Arabidopsis Sequence Match ( AT1G63650.3 )
(BLAST)
001: MATGENRTVP DNLKKQLAVS VRNIQWSYGI FWSVSASQPG VLEWGDGYYN GDIKTRKTIQ AAEVKIDQLG LERSEQLREL YESLSLAESS ASGSSQVTRR
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
Arabidopsis Description
BHLH2EGL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1W8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.