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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • nucleus 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, plastid
iPSORT:plastid
MultiLoc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G409400.1
TraesCS2A01G409600.2
TraesCS2B01G428000.1
TraesCS2D01G406800.1
TraesCS2D01G406900.1
TraesCS2D01G575600.3
TraesCS3A01G046800.1
TraesCS3A01G257800.1
TraesCS3B01G036000.1
TraesCS3B01G290600.1
TraesCS3D01G033100.1
TraesCS3D01G257800.1
TraesCS4B01G397300.1
TraesCS4B01G397400.1
TraesCS4B01G397800.1
TraesCS4D01G224600.1
TraesCS5A01G489500.1
TraesCS5A01G558500.1
TraesCS6A01G259400.1
TraesCS6B01G286700.1
TraesCSU01G029400.1
TraesCSU01G116000.1
TraesCSU01G228400.1
TraesCSU01G237100.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63650.1 TraesCS2A01G409400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2A01G409600.2 AT1G63650.1 12917293
AT1G63650.1 TraesCS2B01G428000.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G406800.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G406900.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G575600.3 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397300.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397800.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4D01G224600.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS5A01G489500.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS5A01G558500.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G029400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G116000.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G228400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G237100.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS3A01G046800.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3B01G036000.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3D01G033100.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3A01G257800.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS3B01G290600.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS3D01G257800.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS6A01G259400.1 AT5G24520.1 12917293
AT1G63650.1 TraesCS6B01G286700.1 AT5G24520.1 12917293
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G029400.1 Wheat nucleus 92.38 91.08
TraesCS2D01G575600.3 Wheat nucleus, plastid 88.48 84.72
TraesCS4B01G397300.1 Wheat nucleus 53.55 74.2
TraesCS2B01G428000.1 Wheat nucleus 65.25 64.22
HORVU2Hr1G096810.5 Barley nucleus 63.83 64.17
TraesCS4B01G397800.1 Wheat nucleus 57.27 63.33
Os01t0577300-00 Rice cytosol 11.35 52.46
OQU82120 Sorghum nucleus 54.08 51.87
OQU81560 Sorghum nucleus 53.9 51.61
OQU82117 Sorghum nucleus 53.55 51.19
Zm00001d026147_P002 Maize nucleus 54.61 50.0
Zm00001d000236_P001 Maize nucleus, plastid 49.29 49.91
GSMUA_Achr11P... Banana nucleus 37.23 44.59
OQU82119 Sorghum nucleus 41.13 42.49
Os01t0576100-00 Rice nucleus 22.87 41.08
GSMUA_Achr8P11430_001 Banana nucleus 39.01 40.29
GSMUA_Achr11P... Banana nucleus 37.94 38.77
GSMUA_Achr5P20600_001 Banana nucleus 38.3 36.73
GSMUA_Achr11P... Banana nucleus 38.48 36.59
VIT_02s0025g03450.t01 Wine grape nucleus 36.7 32.96
VIT_15s0046g02560.t01 Wine grape nucleus 38.3 32.78
KRH41187 Soybean nucleus 35.82 32.06
Solyc08g081140.2.1 Tomato nucleus 35.28 31.79
AT1G63650.1 Thale cress nucleus 33.51 31.71
KRH59908 Soybean nucleus 34.93 31.22
Bra027796.1-P Field mustard nucleus 32.98 30.69
Bra025508.1-P Field mustard nucleus 34.22 30.68
Bra027653.1-P Field mustard nucleus 31.91 30.2
KRH65046 Soybean nucleus 34.57 30.14
AT5G41315.2 Thale cress nucleus 33.69 29.46
KRH48144 Soybean nucleus 33.51 29.08
AT4G00480.2 Thale cress nucleus 29.08 28.28
CDX77694 Canola nucleus 12.23 27.27
TraesCS1B01G112900.1 Wheat nucleus 28.9 25.83
Bra000970.1-P Field mustard nucleus 28.9 24.92
PGSC0003DMT400032140 Potato nucleus 15.78 24.72
TraesCS1B01G113100.4 Wheat nucleus 29.61 24.27
TraesCS3B01G288700.1 Wheat nucleus 18.44 23.48
TraesCS3B01G284800.1 Wheat nucleus 18.26 21.68
TraesCS2B01G469300.1 Wheat nucleus 9.57 21.09
Bra037343.1-P Field mustard cytosol 26.42 20.96
TraesCS2B01G469200.1 Wheat nucleus 9.04 20.73
TraesCS4B01G234700.1 Wheat nucleus 10.64 19.93
TraesCS5B01G306600.1 Wheat nucleus 9.4 19.41
TraesCS1B01G387900.1 Wheat nucleus 8.16 19.25
TraesCS4B01G335200.1 Wheat nucleus 8.33 19.11
TraesCS5B01G307100.1 Wheat nucleus 9.22 19.05
TraesCS5B01G307000.1 Wheat nucleus 9.22 18.64
TraesCS5B01G306800.1 Wheat nucleus 9.22 18.57
TraesCS4B01G276900.1 Wheat nucleus 19.33 18.23
TraesCS4B01G345800.1 Wheat nucleus 9.93 18.01
TraesCS3B01G185400.1 Wheat nucleus 19.68 17.76
TraesCS1B01G208000.1 Wheat nucleus 21.45 17.46
TraesCS4B01G391500.1 Wheat nucleus 9.93 17.45
TraesCS5B01G518400.1 Wheat nucleus 9.4 16.31
TraesCS4B01G021100.1 Wheat nucleus 10.28 15.98
TraesCS4B01G020900.1 Wheat nucleus 10.46 15.95
TraesCS7B01G483600.1 Wheat nucleus 9.04 15.89
TraesCS4B01G021500.1 Wheat nucleus 9.93 15.69
TraesCS4B01G308100.1 Wheat nucleus 9.57 15.56
TraesCS4B01G021200.1 Wheat nucleus 10.11 15.45
TraesCS4B01G020700.1 Wheat nucleus 9.75 15.07
TraesCS5B01G518800.1 Wheat nucleus 8.33 14.92
TraesCS5B01G518500.1 Wheat nucleus 8.51 14.77
TraesCS4B01G308300.1 Wheat nucleus 9.4 14.56
TraesCS5B01G013000.2 Wheat nucleus 9.75 14.55
TraesCS4B01G308200.1 Wheat nucleus 9.04 14.17
TraesCS4B01G056600.2 Wheat nucleus 9.22 13.9
TraesCS3B01G029800.1 Wheat nucleus 7.45 12.8
Protein Annotations
EnsemblPlants:TraesCS4B01G397400.1EnsemblPlantsGene:TraesCS4B01G397400Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:MYC/MYB_NInterPro:bHLH_dom
ncoils:CoilPANTHER:PTHR11514PANTHER:PTHR11514:SF94PFAM:PF00010PFAM:PF14215PFscan:PS50888
SMART:SM00353SUPFAM:SSF47459TIGR:cd00083MapMan:15.5.32::
Description
No Description!
Coordinates
chr4B:+:671703616..671707933
Molecular Weight (calculated)
62868.7 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.338
Length
564 amino acids
Sequence
(BLAST)
001: MALSAAPGVE APPSGKQLSY QLAAAVRSIN WTYAIFWSLS TGLRPPGVLT WKGGFYNGEV KTRKIISSTT TEVTANDLIL QRSEQLRELY ESLLSGKADH
101: RARRPAASLS PEDLGEAEWY YTLSMTYSFR PSQGLPGKSF ASNEHVWLYN AQYADTKTFQ RALLAKTAPI QTVVCIPFMG GVLELGTSDL VLEDPDMVNG
201: IGTSFWELPF QACLESEAPS SSPSTNETRN RDVEIIVFED LDDNIAKGFI SELGEVESMS DANINCVTEE VDDFYGLIEE LDVCALEDNW VIERSFEFMS
301: SLEMAPNMEA PRIDDNTVTL SSSVNGSRPS CFTVWKRSSD WEDMDVRDPG ESQKLLKKVV AGGDWTMRAQ ESNIKTHVLS ERRRREKLNE MFLVLKSLVP
401: SINKMDKASI LAETITYLKE LEQRVEELES SRTPSWHPKE GTGRGLHDVA GRKKIKLSTG CKRKASESER EDGDGPSNVV NVIMMDKEVI LEVQCRWKKL
501: LMTRVFDAIK NLRLDIVSVH TSTPGGLLEL KIRATHQVAA GFATVAPGMI TEALQKAIGN RWQN
Best Arabidopsis Sequence Match ( AT1G63650.3 )
(BLAST)
001: MATGENRTVP DNLKKQLAVS VRNIQWSYGI FWSVSASQPG VLEWGDGYYN GDIKTRKTIQ AAEVKIDQLG LERSEQLREL YESLSLAESS ASGSSQVTRR
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
Arabidopsis Description
BHLH2EGL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1W8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.