Factsheet for Bra004532.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80023	Canola	nucleus	98.97	98.77
CDY56874	Canola	nucleus	92.8	91.85
Bra039279.1-P	Field mustard	nucleus	70.78	74.95
AT2G46510.1	Thale cress	nucleus	77.57	66.61
KRH68922	Soybean	nucleus	50.82	44.91
GSMUA_Achr10P...	Banana	nucleus	42.39	44.88
VIT_15s0046g00320.t01	Wine grape	nucleus	53.09	42.72
GSMUA_Achr8P05350_001	Banana	nucleus	39.51	42.57
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	41.36	42.32
PGSC0003DMT400000652	Potato	nucleus	51.03	41.47
GSMUA_Achr8P26280_001	Banana	cytosol	39.3	41.25
Solyc01g096050.2.1	Tomato	nucleus	51.03	40.99
KRG97199	Soybean	nucleus	51.85	40.71
PGSC0003DMT400018046	Potato	extracellular, nucleus	48.35	40.66
GSMUA_Achr1P28110_001	Banana	nucleus	41.56	40.64
Solyc05g050560.1.1	Tomato	nucleus	47.94	40.24
Bra033273.1-P	Field mustard	nucleus	48.15	40.07
GSMUA_Achr6P35730_001	Banana	nucleus	38.68	38.29
KRH06456	Soybean	nucleus	48.35	38.03
KRH47899	Soybean	nucleus	48.77	37.86
Bra012720.1-P	Field mustard	nucleus	34.98	37.28
Bra038458.1-P	Field mustard	nucleus	34.36	37.03
GSMUA_Achr7P14640_001	Banana	nucleus	36.21	36.36
Bra017527.1-P	Field mustard	nucleus	16.87	36.28
GSMUA_Achr1P14370_001	Banana	cytosol, nucleus, plastid	42.39	35.83
Zm00001d009013_P001	Maize	nucleus	43.0	34.21
TraesCS4D01G275500.1	Wheat	nucleus	41.77	33.95
TraesCS4A01G028900.1	Wheat	nucleus	41.56	33.84
Zm00001d039271_P001	Maize	nucleus	42.8	33.77
TraesCS4B01G276900.1	Wheat	nucleus	41.36	33.61
Os01t0235700-01	Rice	nucleus	42.18	33.23
EER99993	Sorghum	nucleus	42.39	33.12
TraesCS3A01G158600.1	Wheat	nucleus	41.15	32.47
TraesCS3D01G166300.2	Wheat	nucleus	41.36	32.16
TraesCS3B01G185400.1	Wheat	nucleus	41.36	32.16
Bra013263.1-P	Field mustard	nucleus	17.7	31.73
EES19274	Sorghum	nucleus	38.07	31.52
Bra024993.1-P	Field mustard	nucleus	23.05	29.71
HORVU3Hr1G057280.2	Barley	nucleus	41.56	26.34
Bra017523.1-P	Field mustard	nucleus	27.37	26.23
Bra010178.1-P	Field mustard	nucleus	32.3	26.17
Bra017520.1-P	Field mustard	nucleus	26.75	26.1
Bra013264.1-P	Field mustard	nucleus	15.84	25.93
Bra024998.1-P	Field mustard	nucleus	30.86	25.86
Bra024992.1-P	Field mustard	nucleus	13.99	25.09
Zm00001d007536_P001	Maize	plastid	29.22	23.39
Bra013128.1-P	Field mustard	nucleus	10.91	19.85
Bra027653.1-P	Field mustard	nucleus	22.43	18.29
Bra027796.1-P	Field mustard	nucleus	22.43	17.99
Bra039924.1-P	Field mustard	nucleus	11.32	17.57
Bra030210.1-P	Field mustard	nucleus	11.32	17.08
Bra010617.1-P	Field mustard	nucleus	11.52	16.77
Bra037887.1-P	Field mustard	nucleus	17.08	16.7
Bra011790.1-P	Field mustard	nucleus	11.52	16.67
Bra025508.1-P	Field mustard	nucleus	20.78	16.06
Bra039926.1-P	Field mustard	nucleus	9.26	15.52
Bra039927.1-P	Field mustard	nucleus	10.08	15.51
Bra030208.1-P	Field mustard	nucleus	9.47	15.13
Bra030207.1-P	Field mustard	nucleus	10.08	15.03
Bra000970.1-P	Field mustard	nucleus	18.11	13.46
Bra037343.1-P	Field mustard	cytosol	16.05	10.97

Protein Annotations

MapMan:15.5.32	MapMan:25.4.1.7	Gene3D:4.10.280.10	EnsemblPlantsGene:Bra004532	EnsemblPlants:Bra004532.1	EnsemblPlants:Bra004532.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:M4CJZ8	InterPro:MYC/MYB_N	PFAM:PF00010	PFAM:PF14215
PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF69	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00025473CD
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

AT2G46510 (E=3e-110) ATAIB | ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR); DNA binding / transcription factor

Coordinates

chrA05:+:676971..678431

Molecular Weight (calculated)

54273.4 Da

IEP (calculated)

5.297

GRAVY (calculated)

-0.367

Length

486 amino acids

Sequence
(BLAST)

001: MNTSDVVGWE DEDSRSMASA VLGNSASEFL TANSNSNQNL FLVMGTDDGL NEKLSRLVDC PNSETFSWNY AVFWQQTVSR SGQQVLAWGD GCCREPKEEE
101: STVCYNLEEE MRWQYMRKRV LQKLHRMFGG SDEDDYALSL ENVTATEMFF LASMYFFFNH GEGGPGRCFA SGRHVWLSDA VGSDYCFRSF MVKSAGIRTV
201: VMVPTDAGVL ELGSVWPLPE NVELVRSVQA LFMRRVKPPN MSGGKIHKLF GQELNSSDKV AHQVQENVNV VVVEDTNHKV MKTSCNEKRP ASLLPGVAVV
301: EEKRPRKRGR KPANGREEAL NHVEAERQRR EKLNQRFYAL RAVVPNISKM DKASLLGDAI SYIKELQERV KIIEAEGVMT IGTEESQEVV DIQAGEEEVV
401: VRVVSPLESH PASRIIQAMR NSEVVSVVES KLSLAEETLF HTFVVKNNNG SDPMTKEKLI AAAYPQTGLT QQLLLPSSTS QVSGDI

Best Arabidopsis Sequence Match ( AT2G46510.1 )
(BLAST)

001: MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI

Arabidopsis Description

AIBTranscription factor ABA-INDUCIBLE bHLH-TYPE [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.