Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004532.1-P | Field mustard | nucleus | 98.77 | 98.97 |
| CDY56874 | Canola | nucleus | 93.22 | 92.46 |
| CDY66312 | Canola | nucleus | 71.05 | 75.55 |
| CDY27319 | Canola | nucleus | 67.76 | 74.49 |
| AT2G46510.1 | Thale cress | nucleus | 78.44 | 67.49 |
| CDY70012 | Canola | nucleus | 25.05 | 45.69 |
| KRH68922 | Soybean | nucleus | 50.92 | 45.09 |
| GSMUA_Achr10P... | Banana | nucleus | 42.3 | 44.88 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 53.59 | 43.21 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 39.22 | 42.35 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 41.07 | 42.11 |
| PGSC0003DMT400000652 | Potato | nucleus | 51.54 | 41.97 |
| Solyc01g096050.2.1 | Tomato | nucleus | 51.54 | 41.49 |
| CDX90021 | Canola | nucleus | 45.79 | 41.3 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 39.01 | 41.04 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 48.67 | 41.0 |
| KRG97199 | Soybean | nucleus | 51.95 | 40.87 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 41.68 | 40.85 |
| Solyc05g050560.1.1 | Tomato | nucleus | 48.25 | 40.59 |
| CDX77696 | Canola | nucleus | 9.86 | 40.0 |
| CDY70013 | Canola | nucleus | 20.12 | 38.89 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 38.6 | 38.29 |
| KRH06456 | Soybean | nucleus | 48.46 | 38.19 |
| KRH47899 | Soybean | nucleus | 49.08 | 38.18 |
| CDX90525 | Canola | nucleus | 35.32 | 37.72 |
| CDY32242 | Canola | nucleus | 34.5 | 37.25 |
| CDY34468 | Canola | nucleus | 33.88 | 36.59 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 36.14 | 36.36 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 41.89 | 35.48 |
| Zm00001d009013_P001 | Maize | nucleus | 42.92 | 34.21 |
| TraesCS4D01G275500.1 | Wheat | nucleus | 41.68 | 33.95 |
| TraesCS4A01G028900.1 | Wheat | nucleus | 41.48 | 33.84 |
| Zm00001d039271_P001 | Maize | nucleus | 42.71 | 33.77 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 41.27 | 33.61 |
| Os01t0235700-01 | Rice | nucleus | 42.09 | 33.23 |
| EER99993 | Sorghum | nucleus | 42.3 | 33.12 |
| CDY09695 | Canola | nucleus | 32.65 | 32.65 |
| TraesCS3A01G158600.1 | Wheat | nucleus | 41.07 | 32.47 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 41.27 | 32.16 |
| TraesCS3D01G166300.2 | Wheat | nucleus | 41.27 | 32.16 |
| CDY58502 | Canola | nucleus | 29.36 | 31.85 |
| CDX77688 | Canola | nucleus | 29.36 | 31.64 |
| EES19274 | Sorghum | nucleus | 37.99 | 31.52 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 11.09 | 28.42 |
| CDY26910 | Canola | nucleus | 25.46 | 27.99 |
| CDX73261 | Canola | nucleus | 25.46 | 27.99 |
| CDY03185 | Canola | nucleus | 27.1 | 27.91 |
| CDY03195 | Canola | nucleus | 30.6 | 27.34 |
| CDY44507 | Canola | nucleus | 32.85 | 27.3 |
| CDX78808 | Canola | nucleus | 32.24 | 27.12 |
| CDY35179 | Canola | nucleus | 30.6 | 26.51 |
| CDY35183 | Canola | nucleus | 27.52 | 26.43 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 41.48 | 26.34 |
| CDY59973 | Canola | nucleus | 27.52 | 26.33 |
| CDY03183 | Canola | nucleus | 27.52 | 26.33 |
| CDX84081 | Canola | nucleus | 28.54 | 26.28 |
| CDX77694 | Canola | nucleus | 13.14 | 25.3 |
| CDY33482 | Canola | nucleus | 13.96 | 25.09 |
| CDX77699 | Canola | nucleus | 13.96 | 25.09 |
| Zm00001d007536_P001 | Maize | plastid | 29.16 | 23.39 |
| CDX93135 | Canola | nucleus | 10.88 | 19.85 |
| CDX89627 | Canola | nucleus | 10.88 | 19.85 |
| CDY25513 | Canola | nucleus | 22.79 | 19.24 |
| CDX86891 | Canola | nucleus | 20.12 | 18.81 |
| CDX99505 | Canola | nucleus | 20.12 | 18.81 |
| CDY13737 | Canola | nucleus | 11.09 | 18.31 |
| CDY34367 | Canola | nucleus | 22.38 | 18.29 |
| CDX76899 | Canola | nucleus | 12.12 | 18.27 |
| CDY39747 | Canola | nucleus | 20.74 | 18.07 |
| CDY08314 | Canola | nucleus | 21.97 | 17.69 |
| CDY58950 | Canola | nucleus | 20.94 | 17.68 |
| CDY25628 | Canola | nucleus | 11.5 | 17.39 |
| CDY72199 | Canola | nucleus | 11.5 | 16.77 |
| CDY49678 | Canola | nucleus | 11.5 | 16.77 |
| CDX75679 | Canola | nucleus | 11.5 | 16.67 |
| CDX69336 | Canola | nucleus | 11.5 | 16.57 |
| CDY72121 | Canola | nucleus | 10.47 | 16.56 |
| CDX89511 | Canola | nucleus | 10.88 | 16.51 |
| CDX91907 | Canola | nucleus | 18.28 | 16.36 |
| CDY70506 | Canola | nucleus | 17.66 | 16.1 |
| CDY07214 | Canola | mitochondrion, nucleus | 17.86 | 16.05 |
| CDY13735 | Canola | nucleus | 9.45 | 15.92 |
| CDX89512 | Canola | nucleus | 9.65 | 15.88 |
| CDY52591 | Canola | nucleus | 10.06 | 15.56 |
| CDY51155 | Canola | mitochondrion, nucleus | 17.25 | 15.5 |
| CDX89513 | Canola | nucleus | 10.27 | 15.38 |
| CDY25629 | Canola | nucleus | 9.45 | 15.33 |
| CDY52593 | Canola | nucleus | 8.83 | 15.09 |
| CDY25630 | Canola | nucleus | 10.06 | 15.08 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | GO:A0A078CY62 | EnsemblPlants:CDX80023 | ProteinID:CDX80023 |
| ProteinID:CDX80023.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00132901001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 |
| PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF69 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0004EDFC85 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaA05g01330D
Coordinates
chrLK031819:-:1354903..1356366
Molecular Weight (calculated)
54360.5 Da
IEP (calculated)
5.297
GRAVY (calculated)
-0.362
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTSDVVGWE DEDTRSMVSA VLGNSASEFL TANSNSNQNL FLVMGTDDGL NEKLSRLVDC PNSETFSWNY AVFWQQTVSR SGQQVLAWGD GCCREPKEEE
101: STVCYNLEEE MRWQYMRKRV LQKLHRMFGG SDEDDYALSL ENVTATEMFF LASMYFFFNH GEGGPGRCFA SGRHVWLSDA VGSDYCFRSF MVKSAGIRTV
201: VMVPTDAGVL ELGSVWSLPE NVELVRSVQA LFMRRVKPPN MSGGKIHKLF GQELNSSDKV AHQVQENVNV VVVEDTNHKV MKTSCNEKRP ASLLPGGVSV
301: VEEKRPRKRG RKPANGREEA LNHVEAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA ISYIKELQER VKIIEAEGVM TIGTEESQEV VDIQAGEEEV
401: VVRVVSPLES HPASRIIQAM RNSEVVSVVE SKLSLAEETL FHTFVVKNNN GSDPLTKEKL IAAAYPQTGL TQQLLLPSST SQVSGDI
101: STVCYNLEEE MRWQYMRKRV LQKLHRMFGG SDEDDYALSL ENVTATEMFF LASMYFFFNH GEGGPGRCFA SGRHVWLSDA VGSDYCFRSF MVKSAGIRTV
201: VMVPTDAGVL ELGSVWSLPE NVELVRSVQA LFMRRVKPPN MSGGKIHKLF GQELNSSDKV AHQVQENVNV VVVEDTNHKV MKTSCNEKRP ASLLPGGVSV
301: VEEKRPRKRG RKPANGREEA LNHVEAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA ISYIKELQER VKIIEAEGVM TIGTEESQEV VDIQAGEEEV
401: VVRVVSPLES HPASRIIQAM RNSEVVSVVE SKLSLAEETL FHTFVVKNNN GSDPLTKEKL IAAAYPQTGL TQQLLLPSST SQVSGDI
001: MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI
Arabidopsis Description
AIBTranscription factor ABA-INDUCIBLE bHLH-TYPE [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.