Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90021 | Canola | nucleus | 98.5 | 48.7 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 21.35 | 30.0 |
| CDY27319 | Canola | nucleus | 44.19 | 26.64 |
| CDY66312 | Canola | nucleus | 43.82 | 25.55 |
| CDX80023 | Canola | nucleus | 45.69 | 25.05 |
| CDY56874 | Canola | nucleus | 45.69 | 24.85 |
| CDX77694 | Canola | nucleus | 22.47 | 23.72 |
| CDY34468 | Canola | nucleus | 30.71 | 18.18 |
| CDY32242 | Canola | nucleus | 30.71 | 18.18 |
| CDX90525 | Canola | nucleus | 29.59 | 17.32 |
| CDY09695 | Canola | nucleus | 28.09 | 15.4 |
| CDY58502 | Canola | nucleus | 21.72 | 12.92 |
| CDX77688 | Canola | nucleus | 21.72 | 12.83 |
| CDY03195 | Canola | nucleus | 25.47 | 12.48 |
| CDY03183 | Canola | nucleus | 23.6 | 12.38 |
| CDY59973 | Canola | nucleus | 23.6 | 12.38 |
| CDY03185 | Canola | nucleus | 21.72 | 12.26 |
| CDY35179 | Canola | nucleus | 25.47 | 12.1 |
| CDY26910 | Canola | nucleus | 19.85 | 11.96 |
| CDX73261 | Canola | nucleus | 19.85 | 11.96 |
| CDX78808 | Canola | nucleus | 25.84 | 11.92 |
| CDY35183 | Canola | nucleus | 22.47 | 11.83 |
| CDY44507 | Canola | nucleus | 25.84 | 11.77 |
| CDY39747 | Canola | nucleus | 23.97 | 11.45 |
| CDY58950 | Canola | nucleus | 23.97 | 11.09 |
| CDY25513 | Canola | nucleus | 22.85 | 10.57 |
| CDY34367 | Canola | nucleus | 22.85 | 10.23 |
| CDX99505 | Canola | nucleus | 19.85 | 10.17 |
| CDX86891 | Canola | nucleus | 19.85 | 10.17 |
| CDY51155 | Canola | mitochondrion, nucleus | 20.6 | 10.15 |
| CDX91907 | Canola | nucleus | 20.6 | 10.11 |
| CDX84081 | Canola | nucleus | 19.85 | 10.02 |
| CDY07214 | Canola | mitochondrion, nucleus | 20.22 | 9.96 |
| CDY08314 | Canola | nucleus | 22.1 | 9.75 |
| CDY70506 | Canola | nucleus | 18.73 | 9.36 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 4.12 | 6.71 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 5.24 | 5.86 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 5.99 | 5.8 |
| EER99201 | Sorghum | nucleus | 6.37 | 5.74 |
| Zm00001d006150_P001 | Maize | nucleus | 5.99 | 5.5 |
| Zm00001d021164_P001 | Maize | nucleus | 5.62 | 5.17 |
| TraesCS1A01G369200.1 | Wheat | nucleus | 3.75 | 5.05 |
| TraesCS5A01G306200.1 | Wheat | nucleus | 5.24 | 5.02 |
| TraesCS5D01G313600.1 | Wheat | nucleus | 5.24 | 5.02 |
| TraesCS5D01G313500.1 | Wheat | nucleus | 5.24 | 5.02 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 5.24 | 4.98 |
| CDX76899 | Canola | nucleus | 5.99 | 4.95 |
| TraesCS5A01G306400.1 | Wheat | nucleus | 4.12 | 4.93 |
| TraesCS1D01G374800.1 | Wheat | nucleus | 4.87 | 4.91 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 4.87 | 4.85 |
| TraesCS5A01G306700.1 | Wheat | peroxisome | 4.87 | 4.74 |
| TraesCS5D01G313700.1 | Wheat | nucleus | 4.87 | 4.73 |
| TraesCS5D01G313400.1 | Wheat | nucleus | 4.49 | 4.4 |
| TraesCS5A01G306600.1 | Wheat | nucleus | 4.49 | 4.36 |
| KXG25462 | Sorghum | nucleus | 4.49 | 4.32 |
| Zm00001d052728_P001 | Maize | nucleus | 4.12 | 4.0 |
| OQU80777 | Sorghum | nucleus | 4.12 | 3.93 |
| OQU86344 | Sorghum | nucleus | 3.75 | 3.91 |
| CDY72199 | Canola | nucleus | 4.87 | 3.89 |
| CDY49678 | Canola | nucleus | 4.87 | 3.89 |
| CDX89511 | Canola | nucleus | 4.49 | 3.74 |
| CDY25628 | Canola | nucleus | 4.49 | 3.73 |
| TraesCS2A01G448500.1 | Wheat | nucleus | 3.37 | 3.52 |
| CDY13737 | Canola | nucleus | 3.75 | 3.39 |
| CDX89627 | Canola | nucleus | 3.37 | 3.37 |
| CDX93135 | Canola | nucleus | 3.37 | 3.37 |
| OQU80778 | Sorghum | nucleus | 3.37 | 3.33 |
| CDX75679 | Canola | nucleus | 4.12 | 3.27 |
| CDX69336 | Canola | nucleus | 4.12 | 3.25 |
| TraesCS7D01G102200.1 | Wheat | nucleus | 3.0 | 3.12 |
| Os09t0519100-00 | Rice | nucleus | 3.0 | 3.03 |
| HORVU5Hr1G079900.1 | Barley | cytosol | 3.0 | 2.96 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 3.0 | 2.87 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 2.62 | 2.66 |
| CDY33482 | Canola | nucleus | 2.62 | 2.58 |
| CDX77699 | Canola | nucleus | 2.62 | 2.58 |
| TraesCSU01G222600.1 | Wheat | nucleus | 2.25 | 2.44 |
| Zm00001d031717_P001 | Maize | nucleus | 2.25 | 2.36 |
| OQU80776 | Sorghum | nucleus | 2.25 | 2.28 |
| OQU75588 | Sorghum | nucleus | 2.25 | 2.28 |
| CDY52591 | Canola | nucleus | 2.25 | 1.9 |
| CDY25630 | Canola | nucleus | 2.25 | 1.85 |
| CDX89513 | Canola | nucleus | 2.25 | 1.85 |
| CDY52593 | Canola | nucleus | 1.87 | 1.75 |
| CDY13735 | Canola | nucleus | 1.87 | 1.73 |
| CDX89512 | Canola | nucleus | 1.87 | 1.69 |
| CDY25629 | Canola | nucleus | 1.87 | 1.67 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 1.12 | 1.43 |
| CDX77696 | Canola | nucleus | 0.0 | 0.0 |
| CDY70013 | Canola | nucleus | 0.0 | 0.0 |
| CDY72121 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY70012 | EnsemblPlantsGene:GSBRNA2T00094282001 | InterPro:MYC/MYB_N | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF47 | PFAM:PF14215 |
| ProteinID:CDY70012 | ProteinID:CDY70012.1 | SEG:seg | UniParc:UPI0004EE6479 | UniProt:A0A078JWR0 | MapMan:35.1 |
Description
BnaCnng66310DBnaCnng66310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWR0]
Coordinates
chrLK040930:+:402..1742
Molecular Weight (calculated)
29723.1 Da
IEP (calculated)
6.506
GRAVY (calculated)
-0.472
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVGSDDNLQ NKLSDLVETP NSSNFSWNYA IFWQVSRSKS GDLVLCWGDG SCREPKDGER SEMMRMLSMG REEETHQTLR KRVLQKLHAL FGGLDDEEDS
101: CALVLDRVTD TEMFLLASMY FSFPRGQGGP GKCFHSAQPV WLSDLVNSGS DYCVRSFLAK SAGIQTVVLV PTDIGVVELG STSCLPHSDE SLSSISLSFS
201: SPPPPPPPPV RLPVVVANHN DDNSSSKIFG KDLHSSSGFH HQHQQHRQFR EKLTVRKMDD NRVPKRL
101: CALVLDRVTD TEMFLLASMY FSFPRGQGGP GKCFHSAQPV WLSDLVNSGS DYCVRSFLAK SAGIQTVVLV PTDIGVVELG STSCLPHSDE SLSSISLSFS
201: SPPPPPPPPV RLPVVVANHN DDNSSSKIFG KDLHSSSGFH HQHQQHRQFR EKLTVRKMDD NRVPKRL
001: MNIGRLVWNE DDKAIVASLL GKRALDYLLS NSVSNANLLM TLGSDENLQN KLSDLVERPN ASNFSWNYAI FWQISRSKAG DLVLCWGDGY CREPKEGEKS
101: EIVRILSMGR EEETHQTMRK RVLQKLHDLF GGSEEENCAL GLDRVTDTEM FLLSSMYFSF PRGEGGPGKC FASAKPVWLS DVVNSGSDYC VRSFLAKSAG
201: IQTVVLVPTD LGVVELGSTS CLPESEDSIL SIRSLFTSSL PPVRAVALPV TVAEKIDDNR TKIFGKDLHN SGFLQHHQHH QQQQQQPPQQ QQHRQFREKL
301: TVRKMDDRAP KRLDAYPNNG NRFMFSNPGT NNNTLLSPTW VQPENYTRPI NVKEVPSTDE FKFLPLQQSS QRLLPPAQMQ IDFSAASSRA SENNSDGEGG
401: GEWADAVGAD ESGNNRPRKR GRRPANGRAE ALNHVEAERQ RREKLNQRFY ALRSVVPNIS KMDKASLLGD AVSYINELHA KLKVMEAERE RLGYSSNPPI
501: SLDSDINVQT SGEDVTVRIN CPLESHPASR IFHAFEESKV EVINSNLEVS QDTVLHTFVV KSEELTKEKL ISALSREQTN SVQSRTSSGR
101: EIVRILSMGR EEETHQTMRK RVLQKLHDLF GGSEEENCAL GLDRVTDTEM FLLSSMYFSF PRGEGGPGKC FASAKPVWLS DVVNSGSDYC VRSFLAKSAG
201: IQTVVLVPTD LGVVELGSTS CLPESEDSIL SIRSLFTSSL PPVRAVALPV TVAEKIDDNR TKIFGKDLHN SGFLQHHQHH QQQQQQPPQQ QQHRQFREKL
301: TVRKMDDRAP KRLDAYPNNG NRFMFSNPGT NNNTLLSPTW VQPENYTRPI NVKEVPSTDE FKFLPLQQSS QRLLPPAQMQ IDFSAASSRA SENNSDGEGG
401: GEWADAVGAD ESGNNRPRKR GRRPANGRAE ALNHVEAERQ RREKLNQRFY ALRSVVPNIS KMDKASLLGD AVSYINELHA KLKVMEAERE RLGYSSNPPI
501: SLDSDINVQT SGEDVTVRIN CPLESHPASR IFHAFEESKV EVINSNLEVS QDTVLHTFVV KSEELTKEKL ISALSREQTN SVQSRTSSGR
Arabidopsis Description
BHLH13Transcription factor bHLH13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.