Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07214 | Canola | mitochondrion, nucleus | 95.57 | 95.57 |
| CDX91907 | Canola | nucleus | 78.23 | 77.94 |
| CDY70506 | Canola | nucleus | 76.01 | 77.15 |
| Bra037343.1-P | Field mustard | cytosol | 95.02 | 72.43 |
| AT4G00480.2 | Thale cress | nucleus | 74.91 | 70.0 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 17.71 | 50.53 |
| GSMUA_Achr11P... | Banana | nucleus | 33.58 | 38.64 |
| CDY39747 | Canola | nucleus | 35.98 | 34.88 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 34.87 | 34.62 |
| GSMUA_Achr11P... | Banana | nucleus | 34.13 | 33.51 |
| CDY58950 | Canola | nucleus | 35.24 | 33.1 |
| CDY25513 | Canola | nucleus | 34.32 | 32.24 |
| GSMUA_Achr11P... | Banana | nucleus | 35.24 | 32.21 |
| CDY34367 | Canola | nucleus | 34.69 | 31.54 |
| CDY08314 | Canola | nucleus | 35.06 | 31.41 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 31.55 | 29.08 |
| CDY72121 | Canola | nucleus | 15.68 | 27.6 |
| CDX86891 | Canola | nucleus | 26.38 | 27.45 |
| CDX99505 | Canola | nucleus | 26.38 | 27.45 |
| CDX77694 | Canola | nucleus | 10.52 | 22.53 |
| CDY70012 | Canola | nucleus | 10.15 | 20.6 |
| CDX77688 | Canola | nucleus | 15.68 | 18.81 |
| CDY58502 | Canola | nucleus | 15.5 | 18.71 |
| CDX77696 | Canola | nucleus | 4.06 | 18.33 |
| CDY32242 | Canola | nucleus | 15.13 | 18.18 |
| CDY34468 | Canola | nucleus | 15.13 | 18.18 |
| CDY66312 | Canola | nucleus | 15.31 | 18.12 |
| CDY27319 | Canola | nucleus | 14.76 | 18.06 |
| CDX90525 | Canola | nucleus | 14.94 | 17.76 |
| CDY03185 | Canola | nucleus | 15.5 | 17.76 |
| CDX80023 | Canola | nucleus | 15.5 | 17.25 |
| CDY56874 | Canola | nucleus | 15.5 | 17.11 |
| CDY59973 | Canola | nucleus | 16.05 | 17.09 |
| CDY03183 | Canola | nucleus | 16.05 | 17.09 |
| CDY26910 | Canola | nucleus | 13.84 | 16.93 |
| CDX73261 | Canola | nucleus | 13.84 | 16.93 |
| CDY35183 | Canola | nucleus | 15.68 | 16.77 |
| CDY03195 | Canola | nucleus | 16.61 | 16.51 |
| CDX77699 | Canola | nucleus | 8.12 | 16.24 |
| CDX78808 | Canola | nucleus | 16.97 | 15.89 |
| CDY35179 | Canola | nucleus | 16.42 | 15.84 |
| CDX90021 | Canola | nucleus | 15.68 | 15.74 |
| CDY44507 | Canola | nucleus | 16.97 | 15.7 |
| CDY33482 | Canola | nucleus | 7.56 | 15.13 |
| CDX69336 | Canola | nucleus | 9.41 | 15.09 |
| CDY09695 | Canola | nucleus | 13.47 | 14.99 |
| CDX93135 | Canola | nucleus | 7.38 | 14.98 |
| CDX89627 | Canola | nucleus | 7.38 | 14.98 |
| CDX84081 | Canola | nucleus | 14.58 | 14.93 |
| CDX75679 | Canola | nucleus | 9.23 | 14.88 |
| CDY49678 | Canola | nucleus | 9.04 | 14.67 |
| CDY72199 | Canola | nucleus | 9.04 | 14.67 |
| CDX76899 | Canola | nucleus | 7.93 | 13.31 |
| CDY13737 | Canola | nucleus | 7.01 | 12.88 |
| CDY25628 | Canola | nucleus | 7.38 | 12.42 |
| CDX89512 | Canola | nucleus | 6.64 | 12.16 |
| CDX89511 | Canola | nucleus | 7.2 | 12.15 |
| CDY13735 | Canola | nucleus | 6.27 | 11.76 |
| CDY52593 | Canola | nucleus | 6.09 | 11.58 |
| CDY70013 | Canola | nucleus | 5.17 | 11.11 |
| CDY25629 | Canola | nucleus | 6.09 | 11.0 |
| CDY52591 | Canola | nucleus | 6.27 | 10.79 |
| CDX89513 | Canola | nucleus | 6.27 | 10.46 |
| CDY25630 | Canola | nucleus | 6.09 | 10.15 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078IJA8 | UniProt:A0A078IJA8 | EnsemblPlants:CDY51155 | ProteinID:CDY51155 |
| ProteinID:CDY51155.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00098341001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF38 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EDC2F3 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g51900DBnaA09g51900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJA8]
Coordinates
chrLK032970:+:59654..62461
Molecular Weight (calculated)
61562.6 Da
IEP (calculated)
5.433
GRAVY (calculated)
-0.521
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGVEAASG RSKSKNNLLR KQLAVALRSV QWSYAIFWSS SLTQPGVLEW EEGCYNGDIK KRKKSYEAAQ YKYALQRSNQ LRKLYLCMLE GDSNTTISTT
101: HDVDDYGDDE EHNCNSATSM MLSPDDLSDE EWYYIVSMSY VFSPSQCLPG RALVTGETIW LCNAQYTDNK LFSRSLLARS ASIQTVVCFP YLGGVIELGV
201: TELISEDHSL LQHIKSCLLE TSKPDCASYT FSARRDSDDE KYQTKIKTSD GNSNSVLQGN HQIQSDEDVH YKRTVSTLLK YAADKDIPHL QPDLVSTNTE
301: SSFLRWKQRE QPNSILFQEH SNLQTLSQNM LRKILQDVPL MHSLDTKRTL PSKTFGLNQD DPWDTRKENE KFSVLKAMVP TVNQVDKEEI LNNTIKYLQE
401: LEGRVEELES CMGSVNFAER QRKSVNDSVL IEETSGNYDE STKIDGNSGE TEQVTIVRDE THLRVKLKET EVVMEVRCSY RDYIVADIME TLSKLHMDAF
501: SVRSYTLNGF LTLNLKAKFR GAAVASVGMI KRELRRVIGE II
101: HDVDDYGDDE EHNCNSATSM MLSPDDLSDE EWYYIVSMSY VFSPSQCLPG RALVTGETIW LCNAQYTDNK LFSRSLLARS ASIQTVVCFP YLGGVIELGV
201: TELISEDHSL LQHIKSCLLE TSKPDCASYT FSARRDSDDE KYQTKIKTSD GNSNSVLQGN HQIQSDEDVH YKRTVSTLLK YAADKDIPHL QPDLVSTNTE
301: SSFLRWKQRE QPNSILFQEH SNLQTLSQNM LRKILQDVPL MHSLDTKRTL PSKTFGLNQD DPWDTRKENE KFSVLKAMVP TVNQVDKEEI LNNTIKYLQE
401: LEGRVEELES CMGSVNFAER QRKSVNDSVL IEETSGNYDE STKIDGNSGE TEQVTIVRDE THLRVKLKET EVVMEVRCSY RDYIVADIME TLSKLHMDAF
501: SVRSYTLNGF LTLNLKAKFR GAAVASVGMI KRELRRVIGE II
001: MSLTMADGVE AAAGRSKRQN SLLRKQLALA VRSVQWSYAI FWSSSLTQPG VLEWGEGCYN GDMKKRKKSY ESHYKYGLQK SKELRKLYLS MLEGDSGTTV
101: STTHDNLNDD DDNCHSTSMM LSPDDLSDEE WYYLVSMSYV FSPSQCLPGR ASATGETIWL CNAQYAENKL FSRSLLARSA SIQTVVCFPY LGGVIELGVT
201: ELISEDHNLL RNIKSCLMEI SAHQDNDDEK KMEIKISEEK HQLPLGISDE DLHYKRTIST VLNYSADRSG KNDKNIRHRQ PNIVTSEPGS SFLRWKQCEQ
301: QVSGFVQKKK SQNVLRKILH DVPLMHTKRM FPSQNSGLNQ DDPSDRRKEN EKFSVLRTMV PTVNEVDKES ILNNTIKYLQ ELEARVEELE SCMGSVNFVE
401: RQRKTTENLN DSVLIEETSG NYDDSTKIDD NSGETEQVTV FRDKTHLRVK LKETEVVIEV RCSYRDYIVA DIMETLSNLH MDAFSVRSHT LNKFLTLNLK
501: AKFRGAAVAS VGMIKRELRR VIGDLF
101: STTHDNLNDD DDNCHSTSMM LSPDDLSDEE WYYLVSMSYV FSPSQCLPGR ASATGETIWL CNAQYAENKL FSRSLLARSA SIQTVVCFPY LGGVIELGVT
201: ELISEDHNLL RNIKSCLMEI SAHQDNDDEK KMEIKISEEK HQLPLGISDE DLHYKRTIST VLNYSADRSG KNDKNIRHRQ PNIVTSEPGS SFLRWKQCEQ
301: QVSGFVQKKK SQNVLRKILH DVPLMHTKRM FPSQNSGLNQ DDPSDRRKEN EKFSVLRTMV PTVNEVDKES ILNNTIKYLQ ELEARVEELE SCMGSVNFVE
401: RQRKTTENLN DSVLIEETSG NYDDSTKIDD NSGETEQVTV FRDKTHLRVK LKETEVVIEV RCSYRDYIVA DIMETLSNLH MDAFSVRSHT LNKFLTLNLK
501: AKFRGAAVAS VGMIKRELRR VIGDLF
Arabidopsis Description
ATMYC1Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JHC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.