Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39747 | Canola | nucleus | 93.76 | 96.78 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 27.04 | 82.11 |
| AT5G41315.2 | Thale cress | nucleus | 84.92 | 75.97 |
| CDY25513 | Canola | nucleus | 66.38 | 66.38 |
| CDY08314 | Canola | nucleus | 67.59 | 64.46 |
| CDY34367 | Canola | nucleus | 66.55 | 64.43 |
| CDY72121 | Canola | nucleus | 33.8 | 63.31 |
| GSMUA_Achr11P... | Banana | nucleus | 39.17 | 47.98 |
| VIT_02s0025g03450.t01 | Wine grape | nucleus | 50.78 | 46.66 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 40.03 | 42.31 |
| Solyc08g081140.2.1 | Tomato | nucleus | 45.41 | 41.85 |
| GSMUA_Achr11P... | Banana | nucleus | 39.69 | 41.49 |
| GSMUA_Achr11P... | Banana | nucleus | 39.86 | 38.79 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 37.44 | 36.73 |
| CDY07214 | Canola | mitochondrion, nucleus | 33.28 | 35.42 |
| CDY51155 | Canola | mitochondrion, nucleus | 33.1 | 35.24 |
| CDY70506 | Canola | nucleus | 32.58 | 35.21 |
| CDX91907 | Canola | nucleus | 32.58 | 34.56 |
| PGSC0003DMT400032140 | Potato | nucleus | 20.45 | 32.78 |
| CDX86891 | Canola | nucleus | 27.38 | 30.33 |
| CDX99505 | Canola | nucleus | 27.21 | 30.13 |
| CDX77694 | Canola | nucleus | 10.75 | 24.51 |
| CDY70012 | Canola | nucleus | 11.09 | 23.97 |
| CDY27319 | Canola | nucleus | 17.85 | 23.25 |
| CDX77688 | Canola | nucleus | 18.02 | 23.01 |
| CDY58502 | Canola | nucleus | 17.85 | 22.94 |
| CDX77696 | Canola | nucleus | 4.68 | 22.5 |
| CDY66312 | Canola | nucleus | 17.68 | 22.27 |
| CDY56874 | Canola | nucleus | 17.85 | 20.98 |
| CDX80023 | Canola | nucleus | 17.68 | 20.94 |
| CDX77699 | Canola | nucleus | 9.53 | 20.3 |
| CDY03195 | Canola | nucleus | 19.06 | 20.18 |
| CDY34468 | Canola | nucleus | 15.77 | 20.18 |
| CDY03185 | Canola | nucleus | 16.29 | 19.87 |
| CDX89627 | Canola | nucleus | 9.19 | 19.85 |
| CDX90021 | Canola | nucleus | 18.54 | 19.81 |
| CDX90525 | Canola | nucleus | 15.6 | 19.74 |
| CDY32242 | Canola | nucleus | 15.42 | 19.73 |
| CDY26910 | Canola | nucleus | 15.08 | 19.64 |
| CDX73261 | Canola | nucleus | 15.08 | 19.64 |
| CDY35179 | Canola | nucleus | 19.06 | 19.57 |
| CDY33482 | Canola | nucleus | 9.19 | 19.56 |
| CDX93135 | Canola | nucleus | 9.01 | 19.48 |
| CDY59973 | Canola | nucleus | 17.16 | 19.45 |
| CDY03183 | Canola | nucleus | 16.98 | 19.25 |
| CDY35183 | Canola | nucleus | 16.81 | 19.13 |
| CDX78808 | Canola | nucleus | 18.37 | 18.31 |
| CDY13737 | Canola | nucleus | 9.36 | 18.31 |
| CDY44507 | Canola | nucleus | 18.54 | 18.26 |
| CDX76899 | Canola | nucleus | 10.05 | 17.96 |
| CDX89512 | Canola | nucleus | 9.19 | 17.91 |
| CDY25629 | Canola | nucleus | 9.19 | 17.67 |
| CDY09695 | Canola | nucleus | 14.9 | 17.66 |
| CDY70013 | Canola | nucleus | 7.28 | 16.67 |
| CDY13735 | Canola | nucleus | 8.32 | 16.61 |
| CDY49678 | Canola | nucleus | 9.36 | 16.17 |
| CDY72199 | Canola | nucleus | 9.36 | 16.17 |
| CDY25628 | Canola | nucleus | 9.01 | 16.15 |
| CDY52593 | Canola | nucleus | 7.97 | 16.14 |
| CDX75679 | Canola | nucleus | 9.36 | 16.07 |
| CDX84081 | Canola | nucleus | 14.73 | 16.07 |
| CDX69336 | Canola | nucleus | 9.36 | 15.98 |
| CDX89511 | Canola | nucleus | 8.84 | 15.89 |
| CDY52591 | Canola | nucleus | 8.15 | 14.92 |
| CDX89513 | Canola | nucleus | 8.32 | 14.77 |
| CDY25630 | Canola | nucleus | 8.15 | 14.46 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078J763 | UniProt:A0A078J763 | EnsemblPlants:CDY58950 | ProteinID:CDY58950 |
| ProteinID:CDY58950.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00025350001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 |
| PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF28 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0004EDD4BB | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaCnng33960DBnaCnng33960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J763]
Coordinates
chrLK033714:+:6901..12323
Molecular Weight (calculated)
64142.1 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.367
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTGQNRTSV PENLKKQLAI SIRSIQWSYA IFWSVSASQP GVLEWGDGYY NGDIKTRKTI QASEIKADQL GLRRSEQLRE LFESLSIAES SSTGTAAGSQ
101: VSRRASAAAL SPEDLADTEW YYLVCMSFVF KIGEGMPGRT FANGEPIWLC NAGTADSKVF SRSLLAKSAS VNTVICFPFL GGVVEIGTTE HIAEDMNVIQ
201: CVKKSFLEAP DSNATILQPI SSDYHIDNVL DPQHILEDEI YAPMFGTRPF QATSPSRTTN GFDPEHDQLA EDHDSFMAEG INSQKNVKML SFDPRNDDVH
301: YQSVISTIFK TSHQLILGPQ FRNCDKRSSF TRWKKPSPSS CGTASIVAPS QGMLKKIIFE VPRVHQKEKL MLDSPVAGDE TANHAVSEKK RREKLNERFL
401: ILRSIIPSIN KSDKVSILDD TIEYLQELER RVQELESCRE STDTETRGTI TVKRKKPYDA GERTSANCTN NEIGYVKRTH VGEAEPAETG LTDIRIRSFG
501: NEVVIELRCV WREGVLLEIM DVISNLNLDS HSVQSSTGDG LLCLTVSCKH KGSKIATPGM IKEALKRLHG YVEDILA
101: VSRRASAAAL SPEDLADTEW YYLVCMSFVF KIGEGMPGRT FANGEPIWLC NAGTADSKVF SRSLLAKSAS VNTVICFPFL GGVVEIGTTE HIAEDMNVIQ
201: CVKKSFLEAP DSNATILQPI SSDYHIDNVL DPQHILEDEI YAPMFGTRPF QATSPSRTTN GFDPEHDQLA EDHDSFMAEG INSQKNVKML SFDPRNDDVH
301: YQSVISTIFK TSHQLILGPQ FRNCDKRSSF TRWKKPSPSS CGTASIVAPS QGMLKKIIFE VPRVHQKEKL MLDSPVAGDE TANHAVSEKK RREKLNERFL
401: ILRSIIPSIN KSDKVSILDD TIEYLQELER RVQELESCRE STDTETRGTI TVKRKKPYDA GERTSANCTN NEIGYVKRTH VGEAEPAETG LTDIRIRSFG
501: NEVVIELRCV WREGVLLEIM DVISNLNLDS HSVQSSTGDG LLCLTVSCKH KGSKIATPGM IKEALKRLHG YVEDILA
001: MDEETMATGQ NRTTVPENLK KHLAVSVRNI QWSYGIFWSV SASQSGVLEW GDGYYNGDIK TRKTIQASEI KADQLGLRRS EQLSELYESL SVAESSSSGV
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
Arabidopsis Description
GL3Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1R7T3F7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.