Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039924.1-P | Field mustard | nucleus | 98.98 | 93.29 |
| CDX76899 | Canola | nucleus | 95.59 | 87.31 |
| CDX89511 | Canola | nucleus | 82.03 | 75.39 |
| CDY25628 | Canola | nucleus | 80.0 | 73.29 |
| AT2G22750.3 | Thale cress | nucleus | 80.34 | 71.17 |
| CDX75679 | Canola | nucleus | 59.66 | 52.38 |
| CDX69336 | Canola | nucleus | 60.0 | 52.37 |
| CDY72199 | Canola | nucleus | 58.98 | 52.1 |
| CDY49678 | Canola | nucleus | 57.63 | 50.9 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 31.19 | 45.77 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 35.59 | 39.47 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 31.19 | 39.32 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 36.61 | 36.61 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 40.34 | 35.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.64 | 35.4 |
| CDX89627 | Canola | nucleus | 31.53 | 34.83 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 39.32 | 34.73 |
| CDX93135 | Canola | nucleus | 31.19 | 34.46 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 36.95 | 33.64 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 34.92 | 32.91 |
| PGSC0003DMT400033757 | Potato | nucleus | 23.39 | 32.86 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 36.27 | 32.72 |
| CDX89512 | Canola | nucleus | 32.2 | 32.09 |
| CDY13735 | Canola | nucleus | 30.85 | 31.49 |
| CDY25629 | Canola | nucleus | 31.86 | 31.33 |
| KXG37671 | Sorghum | nucleus | 37.63 | 31.18 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 23.73 | 30.7 |
| CDY52593 | Canola | nucleus | 29.49 | 30.53 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 23.73 | 29.91 |
| Os03t0725800-01 | Rice | nucleus | 36.27 | 29.8 |
| Zm00001d033848_P004 | Maize | nucleus | 36.61 | 29.67 |
| CDY52591 | Canola | nucleus | 31.53 | 29.52 |
| CDX89513 | Canola | nucleus | 31.86 | 28.92 |
| Solyc02g091810.1.1 | Tomato | nucleus | 30.85 | 28.62 |
| CDY25630 | Canola | nucleus | 31.53 | 28.62 |
| KRH42021 | Soybean | nucleus | 18.64 | 28.21 |
| PGSC0003DMT400078699 | Potato | nucleus | 30.85 | 28.17 |
| Zm00001d013370_P001 | Maize | plastid | 34.92 | 27.61 |
| Solyc02g091820.1.1 | Tomato | nucleus | 30.17 | 27.3 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 31.53 | 27.27 |
| PGSC0003DMT400078698 | Potato | nucleus | 19.32 | 27.27 |
| Solyc06g064590.1.1 | Tomato | nucleus | 25.42 | 26.69 |
| Solyc06g064580.1.1 | Tomato | nucleus | 27.46 | 26.64 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 33.56 | 26.4 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 33.22 | 26.2 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 33.22 | 25.99 |
| CDX77696 | Canola | nucleus | 10.51 | 25.83 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 15.93 | 23.86 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 26.1 | 23.19 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 26.1 | 22.58 |
| CDY70013 | Canola | nucleus | 16.95 | 19.84 |
| CDX77699 | Canola | nucleus | 15.93 | 17.34 |
| CDY33482 | Canola | nucleus | 15.93 | 17.34 |
| CDY72121 | Canola | nucleus | 14.92 | 14.29 |
| CDX77688 | Canola | nucleus | 21.02 | 13.72 |
| CDY58502 | Canola | nucleus | 20.34 | 13.36 |
| CDX73261 | Canola | nucleus | 20.0 | 13.32 |
| CDY26910 | Canola | nucleus | 20.0 | 13.32 |
| CDX84081 | Canola | nucleus | 22.37 | 12.48 |
| CDY03195 | Canola | nucleus | 21.36 | 11.56 |
| CDY27319 | Canola | nucleus | 17.29 | 11.51 |
| CDY56874 | Canola | nucleus | 18.98 | 11.41 |
| CDX78808 | Canola | nucleus | 22.37 | 11.4 |
| CDY35179 | Canola | nucleus | 21.69 | 11.39 |
| CDY66312 | Canola | nucleus | 17.63 | 11.35 |
| CDY44507 | Canola | nucleus | 22.37 | 11.26 |
| CDY35183 | Canola | nucleus | 19.32 | 11.24 |
| CDY03185 | Canola | nucleus | 17.97 | 11.21 |
| CDY03183 | Canola | nucleus | 19.32 | 11.2 |
| CDX90021 | Canola | nucleus | 20.34 | 11.11 |
| CDX80023 | Canola | nucleus | 18.31 | 11.09 |
| CDY59973 | Canola | nucleus | 18.98 | 11.0 |
| CDY34468 | Canola | nucleus | 16.61 | 10.86 |
| CDY32242 | Canola | nucleus | 15.93 | 10.42 |
| CDX90525 | Canola | nucleus | 15.93 | 10.31 |
| CDY58950 | Canola | nucleus | 18.31 | 9.36 |
| CDY39747 | Canola | nucleus | 17.63 | 9.3 |
| CDY25513 | Canola | nucleus | 17.63 | 9.01 |
| CDY09695 | Canola | nucleus | 14.58 | 8.83 |
| CDX99505 | Canola | nucleus | 15.59 | 8.83 |
| CDX86891 | Canola | nucleus | 15.59 | 8.83 |
| CDY34367 | Canola | nucleus | 17.63 | 8.72 |
| CDY08314 | Canola | nucleus | 16.95 | 8.26 |
| CDX91907 | Canola | nucleus | 13.9 | 7.54 |
| CDY70506 | Canola | nucleus | 13.56 | 7.49 |
| CDY07214 | Canola | mitochondrion, nucleus | 13.22 | 7.2 |
| CDY51155 | Canola | mitochondrion, nucleus | 12.88 | 7.01 |
| CDX77694 | Canola | nucleus | 4.07 | 4.74 |
| CDY70012 | Canola | nucleus | 3.39 | 3.75 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 1.69 | 2.63 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | GO:A0A078FL71 | UniProt:A0A078FL71 | EnsemblPlants:CDY13737 |
| ProteinID:CDY13737 | ProteinID:CDY13737.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00078169001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF48 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EED6BC | InterPro:bHLH_dom |
Description
BnaA09g42390DBnaA09g42390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL71]
Coordinates
chrLK032038:-:59544..60859
Molecular Weight (calculated)
32851.4 Da
IEP (calculated)
8.913
GRAVY (calculated)
-0.456
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSLLGDFPQ SLSSLDDTST CYNFGASCND YLVEEEPSKI LKTTHESPNL HLYPFANSTS PHPQPSSRFL SFEKTGLKVM NHKSPNLIFS PKEKFGSEDL
101: IRRGTKKAQP LARSPSNAQE HILAERKRRE KLTQRFVALS ALIPGLKKMD KASVLGDAIK HIKYLQESVN EYEKQKKGRT LESVVLVNKS QLVLDEHHKL
201: SPSFSDGNRD YSSSNLPEIE VRVSGKDVLI KIICEKQKGN LIKIMGEIEK LGLSITNSSL LPFGPTSDIS IIAQKTCDFD MKVEDVVKSL SCGLS
101: IRRGTKKAQP LARSPSNAQE HILAERKRRE KLTQRFVALS ALIPGLKKMD KASVLGDAIK HIKYLQESVN EYEKQKKGRT LESVVLVNKS QLVLDEHHKL
201: SPSFSDGNRD YSSSNLPEIE VRVSGKDVLI KIICEKQKGN LIKIMGEIEK LGLSITNSSL LPFGPTSDIS IIAQKTCDFD MKVEDVVKSL SCGLS
001: MATAMNVFST KWSSELDIEE YSIIHQFHMN SLVGDVPQSL SSLDDTTTCY NLDASCNKSL VEERPSKILK TTHISPNLHP FSSSNPPPPK HQPSSRILSF
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.