Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033848_P004 | Maize | nucleus | 90.73 | 88.74 |
| Os03t0725800-01 | Rice | nucleus | 81.46 | 80.78 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 71.35 | 74.49 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 77.53 | 73.8 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 77.25 | 72.94 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 75.56 | 71.73 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 34.55 | 61.19 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 30.62 | 58.6 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 27.25 | 56.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.03 | 53.11 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 48.31 | 51.5 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 42.13 | 50.85 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 46.07 | 50.62 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 46.63 | 50.0 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 44.38 | 48.32 |
| Solyc01g106460.2.1 | Tomato | nucleus | 32.87 | 48.15 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 34.83 | 46.62 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 41.01 | 42.44 |
| CDX89627 | Canola | nucleus | 31.46 | 41.95 |
| Bra013128.1-P | Field mustard | nucleus | 30.9 | 41.2 |
| CDX93135 | Canola | nucleus | 30.62 | 40.82 |
| KRH42021 | Soybean | nucleus | 22.19 | 40.51 |
| KRH49880 | Soybean | nucleus | 35.39 | 38.3 |
| CDY13737 | Canola | nucleus | 31.18 | 37.63 |
| CDX89511 | Canola | nucleus | 33.71 | 37.38 |
| PGSC0003DMT400013074 | Potato | nucleus | 36.52 | 36.83 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 35.96 | 36.57 |
| CDX76899 | Canola | nucleus | 33.15 | 36.53 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 34.27 | 36.53 |
| Bra039924.1-P | Field mustard | nucleus | 32.02 | 36.42 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 34.55 | 36.39 |
| AT2G22750.3 | Thale cress | nucleus | 33.99 | 36.34 |
| CDY25628 | Canola | nucleus | 32.58 | 36.02 |
| Bra030210.1-P | Field mustard | nucleus | 32.58 | 36.02 |
| AT4G37850.1 | Thale cress | nucleus | 33.15 | 35.98 |
| KRH10664 | Soybean | nucleus | 36.8 | 35.5 |
| Bra011790.1-P | Field mustard | nucleus | 33.43 | 35.42 |
| CDX75679 | Canola | nucleus | 33.43 | 35.42 |
| KRH21680 | Soybean | nucleus, vacuole | 37.36 | 35.37 |
| CDX69336 | Canola | nucleus | 33.43 | 35.21 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 21.35 | 33.33 |
| Bra010617.1-P | Field mustard | nucleus | 31.18 | 33.23 |
| CDY49678 | Canola | nucleus | 31.18 | 33.23 |
| CDY72199 | Canola | nucleus | 31.18 | 33.23 |
| PGSC0003DMT400033757 | Potato | nucleus | 19.1 | 32.38 |
| KXG37866 | Sorghum | nucleus | 33.15 | 31.81 |
| EES10849 | Sorghum | nucleus | 30.06 | 31.01 |
| EER93684 | Sorghum | nucleus | 32.87 | 30.39 |
| KXG39824 | Sorghum | nucleus | 27.25 | 29.75 |
| Solyc02g091820.1.1 | Tomato | nucleus | 27.25 | 29.75 |
| PGSC0003DMT400078698 | Potato | nucleus | 17.42 | 29.67 |
| Solyc06g064590.1.1 | Tomato | nucleus | 23.31 | 29.54 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 19.1 | 29.06 |
| Solyc02g091810.1.1 | Tomato | nucleus | 25.84 | 28.93 |
| Solyc06g064580.1.1 | Tomato | nucleus | 24.44 | 28.62 |
| EER93685 | Sorghum | mitochondrion | 29.78 | 28.49 |
| PGSC0003DMT400078699 | Potato | nucleus | 25.84 | 28.48 |
| OQU75589 | Sorghum | nucleus | 29.21 | 27.01 |
| OQU77369 | Sorghum | nucleus | 31.46 | 26.67 |
| KXG24110 | Sorghum | nucleus | 29.78 | 26.63 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 14.61 | 26.4 |
| OQU92034 | Sorghum | nucleus | 22.75 | 25.55 |
| OQU92032 | Sorghum | nucleus | 23.03 | 24.12 |
| KXG25462 | Sorghum | nucleus | 14.33 | 18.35 |
| EER99201 | Sorghum | nucleus | 14.33 | 17.23 |
| OQU80778 | Sorghum | nucleus | 12.92 | 17.04 |
| OQU80777 | Sorghum | nucleus | 13.2 | 16.79 |
| OQU86344 | Sorghum | nucleus | 11.52 | 16.02 |
| OQU80776 | Sorghum | nucleus | 11.8 | 15.97 |
| OQU75588 | Sorghum | nucleus | 11.8 | 15.97 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 12.36 | 15.94 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 11.24 | 14.34 |
| EES01345 | Sorghum | nucleus | 16.29 | 11.98 |
| OQU82120 | Sorghum | nucleus | 17.13 | 10.37 |
| OQU82117 | Sorghum | nucleus | 16.85 | 10.17 |
| EES19274 | Sorghum | nucleus | 16.57 | 10.05 |
| OQU81560 | Sorghum | nucleus | 16.29 | 9.85 |
| EER99993 | Sorghum | nucleus | 17.13 | 9.81 |
| OQU82119 | Sorghum | nucleus | 14.33 | 9.34 |
| KXG39194 | Sorghum | nucleus | 17.98 | 9.05 |
| OQU88697 | Sorghum | nucleus | 16.85 | 8.86 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A1B6QIC7 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlants:KXG37671 | ProteinID:KXG37671 | ProteinID:KXG37671.1 | ProteinID:KXG37672.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3001G107400 | SUPFAM:SSF47459 | UniParc:UPI0001C80CEF |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:8326549..8329340
Molecular Weight (calculated)
38551.5 Da
IEP (calculated)
6.320
GRAVY (calculated)
-0.340
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQWFSNMV MDEPSFFHQW QSDALLEQYT EQQIAVAFGQ GEVDHAVAAA LSTMPQQQQQ QQPAVAAEHR PRKAAKVNTS WDSCITEQGS PADSSSPTIL
101: SFGGHAAAAF AKPEPHPHQA PSAAAYYGAA AAAAKAPKQE VLDAAALPFP AKRSYDDMAE AANKAPAATT RPASQNQDHI LAERKRREKL SQRFIALSKI
201: VPGLKKMDKA SVLGDAIKYV KQLQDQVKGL EDEARRRPVE AAVLVKKSQL SADDDEGSSC DENFVGTDAS GTLPEIEARV SDRTVLVRIH CENRKGVLIA
301: ALSEIERLGL SIMNTNVLPF TTSSLDITIM AMAGDDFCLS VKDIVKKLNQ AFKSSF
101: SFGGHAAAAF AKPEPHPHQA PSAAAYYGAA AAAAKAPKQE VLDAAALPFP AKRSYDDMAE AANKAPAATT RPASQNQDHI LAERKRREKL SQRFIALSKI
201: VPGLKKMDKA SVLGDAIKYV KQLQDQVKGL EDEARRRPVE AAVLVKKSQL SADDDEGSSC DENFVGTDAS GTLPEIEARV SDRTVLVRIH CENRKGVLIA
301: ALSEIERLGL SIMNTNVLPF TTSSLDITIM AMAGDDFCLS VKDIVKKLNQ AFKSSF
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.