Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P30620_001 | Banana | nucleus | 76.95 | 79.32 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 73.95 | 75.54 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 41.62 | 69.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 61.98 | 64.29 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 62.87 | 63.25 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 31.74 | 61.99 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 33.83 | 60.75 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 53.59 | 60.68 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 45.51 | 57.14 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 37.72 | 53.85 |
| Solyc01g106460.2.1 | Tomato | nucleus | 36.53 | 50.21 |
| KXG37671 | Sorghum | nucleus | 51.5 | 48.31 |
| Os03t0725800-01 | Rice | nucleus | 51.8 | 48.19 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 44.31 | 47.28 |
| Zm00001d033848_P004 | Maize | nucleus | 51.2 | 46.98 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 47.9 | 46.92 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 46.41 | 45.06 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 50.3 | 44.92 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 50.0 | 44.53 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 50.0 | 44.3 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 43.71 | 43.71 |
| Zm00001d013370_P001 | Maize | plastid | 47.6 | 42.63 |
| Bra013128.1-P | Field mustard | nucleus | 33.53 | 41.95 |
| CDX89627 | Canola | nucleus | 33.53 | 41.95 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 43.71 | 41.71 |
| CDX93135 | Canola | nucleus | 33.23 | 41.57 |
| KRH42021 | Soybean | nucleus | 24.25 | 41.54 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 41.92 | 41.42 |
| PGSC0003DMT400013074 | Potato | nucleus | 43.41 | 41.08 |
| KRH49880 | Soybean | nucleus | 39.82 | 40.43 |
| KRH10664 | Soybean | nucleus | 43.71 | 39.57 |
| CDY13737 | Canola | nucleus | 34.73 | 39.32 |
| KRH21680 | Soybean | nucleus, vacuole | 44.01 | 39.1 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 26.65 | 39.04 |
| Bra039924.1-P | Field mustard | nucleus | 35.63 | 38.02 |
| CDX89511 | Canola | nucleus | 36.53 | 38.01 |
| CDX76899 | Canola | nucleus | 36.53 | 37.77 |
| CDY25628 | Canola | nucleus | 35.93 | 37.27 |
| AT4G37850.1 | Thale cress | nucleus | 36.53 | 37.2 |
| Bra030210.1-P | Field mustard | nucleus | 35.63 | 36.96 |
| AT2G22750.3 | Thale cress | nucleus | 36.83 | 36.94 |
| CDY49678 | Canola | nucleus | 36.83 | 36.83 |
| CDX75679 | Canola | nucleus | 36.83 | 36.61 |
| Bra011790.1-P | Field mustard | nucleus | 36.83 | 36.61 |
| Bra010617.1-P | Field mustard | nucleus | 36.23 | 36.23 |
| CDY72199 | Canola | nucleus | 36.23 | 36.23 |
| PGSC0003DMT400033757 | Potato | nucleus | 22.75 | 36.19 |
| CDX69336 | Canola | nucleus | 35.63 | 35.21 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 22.75 | 32.48 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 18.86 | 31.98 |
| Solyc06g064590.1.1 | Tomato | nucleus | 26.35 | 31.32 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 29.94 | 30.12 |
| Solyc06g064580.1.1 | Tomato | nucleus | 27.25 | 29.93 |
| PGSC0003DMT400078698 | Potato | nucleus | 18.26 | 29.19 |
| Solyc02g091810.1.1 | Tomato | nucleus | 27.25 | 28.62 |
| PGSC0003DMT400078699 | Potato | nucleus | 27.54 | 28.48 |
| Solyc02g091820.1.1 | Tomato | nucleus | 27.54 | 28.22 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 28.74 | 28.15 |
| GSMUA_Achr10P... | Banana | nucleus | 17.37 | 14.54 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 17.07 | 14.47 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 19.16 | 14.19 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 19.46 | 14.04 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 19.46 | 13.68 |
| GSMUA_Achr11P... | Banana | nucleus | 17.96 | 13.39 |
| GSMUA_Achr11P... | Banana | nucleus | 18.86 | 13.38 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 18.56 | 13.36 |
| GSMUA_Achr10P... | Banana | nucleus | 17.96 | 13.07 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 17.07 | 12.95 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 19.46 | 12.82 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 17.96 | 12.79 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 21.26 | 12.59 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 13.77 | 12.5 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 17.96 | 12.4 |
| GSMUA_Achr11P... | Banana | nucleus | 21.86 | 12.31 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 18.26 | 12.27 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 20.06 | 12.27 |
| GSMUA_Achr11P... | Banana | nucleus | 19.46 | 11.78 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 19.76 | 11.48 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 19.76 | 11.22 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 16.17 | 11.0 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 19.16 | 10.94 |
| GSMUA_Achr11P... | Banana | nucleus | 15.57 | 10.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.17 | 10.44 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 20.06 | 10.29 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 13.77 | 9.41 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 15.57 | 9.32 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | InterPro:ACT_dom | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr7G27600_001 | EnsemblPlants:GSMUA_Achr7P27600_001 | EnsemblPlants:GSMUA_Achr7T27600_001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR002912 | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M0TL96 | PFAM:PF00010 |
| PFscan:PS50888 | PFscan:PS51671 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000296EAA7 | InterPro:bHLH_dom | : | : | : | : |
Description
Putative Transcription factor bHLH25 [Source:GMGC_GENE;Acc:GSMUA_Achr7G27600_001]
Coordinates
chr7:-:28567204..28568425
Molecular Weight (calculated)
36561.2 Da
IEP (calculated)
5.737
GRAVY (calculated)
-0.439
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPAAEWYS DAGMGGNFFD QWDVIDQFTA QEIAAALEQD LQRSFSSESY NSLPADQPPA SAERPKKTLK AGSWSSCTTE QNSALVPNAS SPSILSFGNP
101: DSPSDQNNIY GGLVRVVKPE KEMDALVHHG SKRNYEATVG QGSKGVNTGT RSTYHKEHII AERKRREKLS QRFIALSAIV PGLKKMDKAS VLGDAIKYLK
201: QLEEKVKILE DQAAKRTVES AVLVKKSQLC ADDDSSSCDE NFDGQQCGDS LQEIEAKMSE KAVLVKIHCE NRKGVLVKAL SEIEKLHLSV VNTSVIPFAG
301: SSLDITVMAQ IEEGFDMTVT DLVKKLNSAF RKLT
101: DSPSDQNNIY GGLVRVVKPE KEMDALVHHG SKRNYEATVG QGSKGVNTGT RSTYHKEHII AERKRREKLS QRFIALSAIV PGLKKMDKAS VLGDAIKYLK
201: QLEEKVKILE DQAAKRTVES AVLVKKSQLC ADDDSSSCDE NFDGQQCGDS LQEIEAKMSE KAVLVKIHCE NRKGVLVKAL SEIEKLHLSV VNTSVIPFAG
301: SSLDITVMAQ IEEGFDMTVT DLVKKLNSAF RKLT
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.