Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10664 | Soybean | nucleus | 89.1 | 90.79 |
| KRH49880 | Soybean | nucleus | 59.04 | 67.48 |
| KRH42021 | Soybean | nucleus | 33.51 | 64.62 |
| Solyc01g106460.2.1 | Tomato | nucleus | 39.89 | 61.73 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 52.13 | 56.98 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 28.46 | 53.23 |
| PGSC0003DMT400013074 | Potato | nucleus | 45.48 | 48.44 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 29.52 | 47.44 |
| CDX89627 | Canola | nucleus | 33.51 | 47.19 |
| CDX93135 | Canola | nucleus | 32.71 | 46.07 |
| Bra013128.1-P | Field mustard | nucleus | 32.71 | 46.07 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 39.1 | 44.01 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 31.12 | 43.98 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 38.3 | 43.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.97 | 43.17 |
| KRH40248 | Soybean | cytosol | 16.22 | 42.36 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 35.9 | 41.67 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 32.18 | 41.02 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 35.37 | 40.67 |
| KRH77193 | Soybean | nucleus | 34.31 | 39.33 |
| KRH28296 | Soybean | nucleus | 36.44 | 39.26 |
| KRH23624 | Soybean | nucleus | 29.52 | 39.08 |
| KRH58187 | Soybean | endoplasmic reticulum | 34.57 | 38.69 |
| KRH28295 | Soybean | nucleus | 32.18 | 38.66 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 31.91 | 38.34 |
| KRH09683 | Soybean | nucleus | 26.6 | 38.17 |
| KRH04347 | Soybean | nucleus | 34.57 | 38.12 |
| KRH58186 | Soybean | nucleus | 36.44 | 37.95 |
| KRH77192 | Soybean | nucleus | 34.31 | 37.83 |
| KRH04348 | Soybean | nucleus | 37.5 | 37.8 |
| KRH47401 | Soybean | nucleus | 20.21 | 37.44 |
| KXG37671 | Sorghum | nucleus | 35.37 | 37.36 |
| KRH77195 | Soybean | nucleus | 36.17 | 36.96 |
| KRH44509 | Soybean | nucleus | 20.74 | 36.62 |
| Os03t0725800-01 | Rice | nucleus | 34.84 | 36.49 |
| Zm00001d033848_P004 | Maize | nucleus | 34.84 | 35.99 |
| KRH23623 | Soybean | nucleus | 20.74 | 35.78 |
| KRH58189 | Soybean | nucleus | 35.64 | 35.08 |
| KRH44510 | Soybean | nucleus | 25.53 | 34.91 |
| Zm00001d013370_P001 | Maize | plastid | 34.31 | 34.58 |
| KRH47400 | Soybean | nucleus | 24.73 | 34.57 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 31.12 | 34.31 |
| KRH04346 | Soybean | nucleus | 33.51 | 33.96 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 33.78 | 33.96 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 33.78 | 33.87 |
| KRH47399 | Soybean | nucleus | 30.59 | 33.72 |
| KRH23621 | Soybean | nucleus | 25.8 | 33.33 |
| KRH44511 | Soybean | nucleus | 28.99 | 33.23 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 33.24 | 33.16 |
| KRH09685 | Soybean | cytosol | 26.06 | 33.11 |
| KRH66425 | Soybean | nucleus | 25.27 | 30.45 |
| KRH00979 | Soybean | nucleus | 24.2 | 29.93 |
| KRH48860 | Soybean | nucleus | 25.0 | 29.75 |
| KRH00980 | Soybean | nucleus | 15.96 | 29.56 |
| KRH48847 | Soybean | nucleus | 28.99 | 28.61 |
| KRH48858 | Soybean | nucleus | 24.47 | 28.57 |
| KRH47398 | Soybean | nucleus | 27.93 | 28.38 |
| KRH66407 | Soybean | nucleus | 29.26 | 28.21 |
| KRH00981 | Soybean | nucleus | 23.94 | 27.69 |
| KRH44512 | Soybean | nucleus | 27.39 | 27.47 |
| KRH40246 | Soybean | nucleus, vacuole | 19.15 | 26.67 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 23.4 | 26.51 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 21.01 | 23.17 |
| KRH06400 | Soybean | nucleus | 16.76 | 13.52 |
| KRH47834 | Soybean | nucleus | 16.22 | 13.15 |
| KRH75613 | Soybean | nucleus | 21.01 | 12.4 |
| KRH19522 | Soybean | nucleus | 16.49 | 12.25 |
| KRH32144 | Soybean | nucleus | 16.22 | 12.1 |
| KRH74418 | Soybean | nucleus | 20.48 | 11.99 |
| KRH45440 | Soybean | nucleus | 20.74 | 11.93 |
| KRH68922 | Soybean | nucleus | 17.02 | 11.64 |
| KRH06456 | Soybean | nucleus | 18.62 | 11.33 |
| KRG97199 | Soybean | nucleus | 17.29 | 10.5 |
| KRH47899 | Soybean | nucleus | 17.29 | 10.38 |
| KRH05127 | Soybean | nucleus, plastid | 7.98 | 10.24 |
| KRH39540 | Soybean | nucleus | 19.68 | 10.12 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 14.89 | 9.79 |
| KRH41187 | Soybean | nucleus | 15.69 | 9.37 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 14.63 | 9.35 |
| KRH59908 | Soybean | nucleus | 15.43 | 9.19 |
| KRH32008 | Soybean | extracellular, plastid | 15.69 | 8.89 |
| KRH71432 | Soybean | nucleus | 15.16 | 8.73 |
| KRH65046 | Soybean | nucleus | 13.3 | 7.73 |
| KRH48144 | Soybean | nucleus | 13.3 | 7.69 |
Protein Annotations
| EntrezGene:100798018 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02008362 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_13G253500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1M2I9 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH21680 | ProteinID:KRH21680 | ProteinID:KRH21680.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI00023CEC49 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:35963886..35967022
Molecular Weight (calculated)
42660.2 Da
IEP (calculated)
7.597
GRAVY (calculated)
-0.337
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDFNACTWD VVLFDILIRL IASAVFHFMR TSHMEISSIR GLPEMGIIED PNFLHHWQLN SIDTTSLTGA PFGEILQKHS FSDNSNFNPK TSMETSPTGI
101: ERPAKQLRNN SWNHNKSQQQ TPETQFASCS NLLSFVNSNY TSELGLVKPK VEMVCPKINN NTLADMLISQ GNLGNQNYLF KASQEAKKIE TRPKLSQPQD
201: HIIAERKRRE KLSQRFIALS ALVPGLKKMD KASVLGEAIK YLKQMQEKVS ALEEEQNRKR TVESVVIVKK SRLSSDAEDS SSSETGDTFD EALPEIEARF
301: YERNVLIRIH CEKNKGVIEK TISEIEKLHL KVINSSALTF GSFILDITII AQMDMEFCMT VKDLVRSLRS AFSYFV
101: ERPAKQLRNN SWNHNKSQQQ TPETQFASCS NLLSFVNSNY TSELGLVKPK VEMVCPKINN NTLADMLISQ GNLGNQNYLF KASQEAKKIE TRPKLSQPQD
201: HIIAERKRRE KLSQRFIALS ALVPGLKKMD KASVLGEAIK YLKQMQEKVS ALEEEQNRKR TVESVVIVKK SRLSSDAEDS SSSETGDTFD EALPEIEARF
301: YERNVLIRIH CEKNKGVIEK TISEIEKLHL KVINSSALTF GSFILDITII AQMDMEFCMT VKDLVRSLRS AFSYFV
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.