Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH44512 | Soybean | nucleus | 88.11 | 86.93 |
| KRH09683 | Soybean | nucleus | 31.89 | 45.04 |
| KRH23621 | Soybean | nucleus | 35.41 | 45.02 |
| KRH40248 | Soybean | cytosol | 17.3 | 44.44 |
| KRH09685 | Soybean | cytosol | 35.14 | 43.92 |
| KRH23624 | Soybean | nucleus | 33.51 | 43.66 |
| KRH44509 | Soybean | nucleus | 24.86 | 43.19 |
| KRH47401 | Soybean | nucleus | 23.51 | 42.86 |
| KRH47399 | Soybean | nucleus | 38.65 | 41.94 |
| KRH23623 | Soybean | nucleus | 24.05 | 40.83 |
| KRH44511 | Soybean | nucleus | 35.95 | 40.55 |
| KRH44510 | Soybean | nucleus | 27.84 | 37.45 |
| KRH00979 | Soybean | nucleus | 30.27 | 36.84 |
| KRH47400 | Soybean | nucleus | 26.76 | 36.8 |
| KRH48847 | Soybean | nucleus | 37.57 | 36.48 |
| KRH66407 | Soybean | nucleus | 36.49 | 34.62 |
| KRH48860 | Soybean | nucleus | 28.38 | 33.23 |
| KRH66425 | Soybean | nucleus | 27.57 | 32.69 |
| KRH28295 | Soybean | nucleus | 27.57 | 32.59 |
| KRH58187 | Soybean | endoplasmic reticulum | 29.46 | 32.44 |
| KRH48858 | Soybean | nucleus | 28.11 | 32.3 |
| KRH77195 | Soybean | nucleus | 31.89 | 32.07 |
| KRH00980 | Soybean | nucleus | 17.3 | 31.53 |
| KRH04347 | Soybean | nucleus | 28.92 | 31.38 |
| KRH77193 | Soybean | nucleus | 27.3 | 30.79 |
| KRH00981 | Soybean | nucleus | 27.03 | 30.77 |
| KRH40246 | Soybean | nucleus, vacuole | 21.62 | 29.63 |
| KRH04346 | Soybean | nucleus | 29.46 | 29.38 |
| KRH58189 | Soybean | nucleus | 30.0 | 29.06 |
| KRH49880 | Soybean | nucleus | 25.68 | 28.88 |
| KRH58186 | Soybean | nucleus | 27.84 | 28.53 |
| KRH10664 | Soybean | nucleus | 28.11 | 28.18 |
| KRH04348 | Soybean | nucleus | 28.38 | 28.15 |
| KRH21680 | Soybean | nucleus, vacuole | 28.38 | 27.93 |
| KRH77192 | Soybean | nucleus | 25.68 | 27.86 |
| KRH28296 | Soybean | nucleus | 25.41 | 26.93 |
| KRH42021 | Soybean | nucleus | 14.05 | 26.67 |
| KRH06400 | Soybean | nucleus | 13.78 | 10.94 |
| KRH47834 | Soybean | nucleus | 13.24 | 10.56 |
| KRH75613 | Soybean | nucleus | 17.03 | 9.89 |
| KRH74418 | Soybean | nucleus | 16.76 | 9.66 |
| KRH45440 | Soybean | nucleus | 16.76 | 9.48 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 13.51 | 8.74 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 13.78 | 8.67 |
| KRH68922 | Soybean | nucleus | 12.7 | 8.55 |
| KRH41187 | Soybean | nucleus | 14.32 | 8.41 |
| KRH32144 | Soybean | nucleus | 11.35 | 8.33 |
| KRH19522 | Soybean | nucleus | 11.35 | 8.3 |
| KRH39540 | Soybean | nucleus | 16.22 | 8.21 |
| KRH32008 | Soybean | extracellular, plastid | 14.59 | 8.13 |
| KRH71432 | Soybean | nucleus | 14.05 | 7.96 |
| KRG97199 | Soybean | nucleus | 13.24 | 7.92 |
| KRH47899 | Soybean | nucleus | 13.24 | 7.83 |
| KRH59908 | Soybean | nucleus | 13.24 | 7.77 |
| KRH05127 | Soybean | nucleus, plastid | 5.95 | 7.51 |
| KRH06456 | Soybean | nucleus | 12.16 | 7.28 |
| KRH65046 | Soybean | nucleus | 11.62 | 6.65 |
| KRH48144 | Soybean | nucleus | 11.62 | 6.62 |
Protein Annotations
| EntrezGene:100777846 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02004149 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_07G027100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7KZB4 | EnsemblPlants:KRH47398 | ProteinID:KRH47398 | ProteinID:KRH47398.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF48 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233808E | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:2131942..2134796
Molecular Weight (calculated)
41368.1 Da
IEP (calculated)
8.479
GRAVY (calculated)
-0.502
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEPCQQYWF SDMEIRDFDF FNQSQNHKIG SLDRDEDRIF REIMMHQPVF SSDSDTHSPK ILSKSIHGGD SGYNTYTALA NNKSSNSNLV MKSNSSNFIF
101: SSQHAPPEKP STATVASPTA YILSFGDSTL VAATRQNYGG KQPYHEEVVV GSGGVCLPSK GVSEKHDVEP TTANQTTKRS RSSAETLDHI MTERKRRREL
201: TERFIALSAT IPGLKKIDKA TILSEAITHV KRLKERVREL EEQCKRTKVE SVSFVHQRPH ITTDKGTTSG AMNSDEWCRT NEALPTVEAR VFKKDVLLRI
301: HCKIQSGILI KILDHLNSLD LSTISNSVMP FGSSTLDISI IAQMGDKFKV TMNDLVKNLR LALLQSSEVQ
101: SSQHAPPEKP STATVASPTA YILSFGDSTL VAATRQNYGG KQPYHEEVVV GSGGVCLPSK GVSEKHDVEP TTANQTTKRS RSSAETLDHI MTERKRRREL
201: TERFIALSAT IPGLKKIDKA TILSEAITHV KRLKERVREL EEQCKRTKVE SVSFVHQRPH ITTDKGTTSG AMNSDEWCRT NEALPTVEAR VFKKDVLLRI
301: HCKIQSGILI KILDHLNSLD LSTISNSVMP FGSSTLDISI IAQMGDKFKV TMNDLVKNLR LALLQSSEVQ
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.