Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 84.09 | 81.8 |
| KRH71432 | Soybean | nucleus | 60.49 | 52.99 |
| KRH32008 | Soybean | extracellular, plastid | 60.66 | 52.26 |
| AT4G09820.1 | Thale cress | nucleus | 44.76 | 49.42 |
| VIT_07s0104g00090.t01 | Wine grape | nucleus | 59.44 | 48.85 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 47.55 | 48.23 |
| CDX86891 | Canola | nucleus | 41.96 | 46.07 |
| CDX99505 | Canola | nucleus | 41.96 | 46.07 |
| Bra037887.1-P | Field mustard | nucleus | 38.99 | 44.87 |
| Solyc09g065100.1.1 | Tomato | nucleus | 52.45 | 44.12 |
| PGSC0003DMT400033569 | Potato | nucleus | 45.28 | 43.9 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 49.13 | 43.16 |
| TraesCS1A01G102400.2 | Wheat | nucleus, vacuole | 40.91 | 37.38 |
| TraesCS1B01G112900.1 | Wheat | nucleus | 39.51 | 35.82 |
| TraesCS1B01G113100.4 | Wheat | nucleus | 41.26 | 34.3 |
| Zm00001d019170_P001 | Maize | nucleus | 38.29 | 32.49 |
| OQU88697 | Sorghum | nucleus | 38.11 | 32.2 |
| HORVU1Hr1G020370.2 | Barley | extracellular, nucleus | 27.1 | 30.45 |
| TraesCS1D01G094200.1 | Wheat | nucleus | 33.57 | 30.43 |
| KRH41187 | Soybean | nucleus | 32.17 | 29.21 |
| KRH59908 | Soybean | nucleus | 31.82 | 28.84 |
| KRH48144 | Soybean | nucleus | 30.59 | 26.92 |
| KRH65046 | Soybean | nucleus | 29.9 | 26.43 |
| PGSC0003DMT400028054 | Potato | cytosol | 8.74 | 25.38 |
| PGSC0003DMT400028052 | Potato | nucleus | 8.74 | 24.63 |
| KRH42021 | Soybean | nucleus | 8.22 | 24.1 |
| KRH47834 | Soybean | nucleus | 19.23 | 23.71 |
| KRH05127 | Soybean | nucleus, plastid | 11.89 | 23.21 |
| KRH06400 | Soybean | nucleus | 18.88 | 23.18 |
| KRH23623 | Soybean | nucleus | 8.04 | 21.1 |
| KRH32144 | Soybean | nucleus | 18.18 | 20.63 |
| KRH68922 | Soybean | nucleus | 19.23 | 20.0 |
| KRH19522 | Soybean | nucleus | 17.66 | 19.96 |
| KRH28295 | Soybean | nucleus | 10.84 | 19.81 |
| KRH28296 | Soybean | nucleus | 12.06 | 19.77 |
| KRH74418 | Soybean | nucleus | 21.85 | 19.47 |
| KRH77195 | Soybean | nucleus | 12.24 | 19.02 |
| KRH75613 | Soybean | nucleus | 21.15 | 19.0 |
| KRH09683 | Soybean | nucleus | 8.57 | 18.7 |
| KRH49880 | Soybean | nucleus | 10.66 | 18.54 |
| KRG97199 | Soybean | nucleus | 19.76 | 18.26 |
| KRH47401 | Soybean | nucleus | 6.47 | 18.23 |
| KRH77192 | Soybean | nucleus | 10.84 | 18.18 |
| KRH45440 | Soybean | nucleus | 20.63 | 18.04 |
| KRH06456 | Soybean | nucleus | 19.41 | 17.96 |
| KRH04348 | Soybean | nucleus | 11.54 | 17.69 |
| KRH66425 | Soybean | nucleus | 9.44 | 17.31 |
| KRH23624 | Soybean | nucleus | 8.57 | 17.25 |
| KRH04346 | Soybean | nucleus | 11.19 | 17.25 |
| KRH39540 | Soybean | nucleus | 21.85 | 17.1 |
| KRH47899 | Soybean | nucleus | 18.71 | 17.09 |
| KRH44509 | Soybean | nucleus | 6.29 | 16.9 |
| KRH48860 | Soybean | nucleus | 9.27 | 16.77 |
| KRH58189 | Soybean | nucleus | 11.19 | 16.75 |
| KRH00980 | Soybean | nucleus | 5.94 | 16.75 |
| KRH58186 | Soybean | nucleus | 10.49 | 16.62 |
| KRH23621 | Soybean | nucleus | 8.39 | 16.49 |
| KRH44510 | Soybean | nucleus | 7.87 | 16.36 |
| KRH44511 | Soybean | nucleus | 9.27 | 16.16 |
| KRH40248 | Soybean | cytosol | 4.02 | 15.97 |
| KRH09685 | Soybean | cytosol | 8.22 | 15.88 |
| KRH47399 | Soybean | nucleus | 9.44 | 15.84 |
| KRH40246 | Soybean | nucleus, vacuole | 7.34 | 15.56 |
| KRH77193 | Soybean | nucleus | 8.92 | 15.55 |
| KRH10664 | Soybean | nucleus | 9.97 | 15.45 |
| KRH47400 | Soybean | nucleus | 7.17 | 15.24 |
| KRH48858 | Soybean | nucleus | 8.39 | 14.91 |
| KRH21680 | Soybean | nucleus, vacuole | 9.79 | 14.89 |
| KRH58187 | Soybean | endoplasmic reticulum | 8.74 | 14.88 |
| KRH66407 | Soybean | nucleus | 10.14 | 14.87 |
| KRH00979 | Soybean | nucleus | 7.69 | 14.47 |
| KRH48847 | Soybean | nucleus | 9.62 | 14.44 |
| KRH04347 | Soybean | nucleus | 8.57 | 14.37 |
| KRH44512 | Soybean | nucleus | 9.27 | 14.13 |
| KRH00981 | Soybean | nucleus | 7.87 | 13.85 |
| KRH47398 | Soybean | nucleus | 8.74 | 13.51 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02002043 | ncoils:Coil | EnsemblPlantsGene:GLYMA_03G152800 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1JNT5 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH67189 | ProteinID:KRH67189 | ProteinID:KRH67189.1 |
| InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF93 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002968890 | InterPro:bHLH_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:36781933..36789951
Molecular Weight (calculated)
64161.4 Da
IEP (calculated)
6.373
GRAVY (calculated)
-0.339
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPPPNNSL QTMLRAAVQS VQWTYSLFWQ LCPHKGILTW GDGYYNGAIK TRKTVQAMEV STEEASLQRS EQLRELYESL SGGETNAKTR RPCASLSPED
101: LTETEWFYLL CVSFSFHPGL GLPGTAYARR QHLWLSGANE VDSKTFSRAI LAKTVVCIPV LEGVVELGTT DKMEEDLNFI QHIKSFFIDQ QHPALTAKPA
201: LSEQYSTSKP TSSSSSYPLV TANNTIPIQN IVDRGEAIIL NNNTKEAELA VPNSSFIPSE LMELDATLEE FRVGSSGDGS NHLDSFPTEK SMALCSAGLE
301: LLQLQLPPAP AHPPTENLAQ GGTDTHYSQT VSSILQKNSR RWPESPSLNL LTDSFQSAFN KWNSGADDYQ HHFHVSVASV TSQWLLKYIL FSVPYLHTNW
401: LKGKGTSPYE TSHVMAERHR REKLNERFLI LRSMVPSVTR MDKASILGDT IEYIKQLRDK IESLEARKRL TGKRRMRQVE VSIIESEALL EVECVHREGL
501: LLDLMTKLRE LGVEVMMVQS WVKDDGVFVA EMRAMVRENG NGIKASVIEV KNALNQIIPR HEPYTLASSD HF
101: LTETEWFYLL CVSFSFHPGL GLPGTAYARR QHLWLSGANE VDSKTFSRAI LAKTVVCIPV LEGVVELGTT DKMEEDLNFI QHIKSFFIDQ QHPALTAKPA
201: LSEQYSTSKP TSSSSSYPLV TANNTIPIQN IVDRGEAIIL NNNTKEAELA VPNSSFIPSE LMELDATLEE FRVGSSGDGS NHLDSFPTEK SMALCSAGLE
301: LLQLQLPPAP AHPPTENLAQ GGTDTHYSQT VSSILQKNSR RWPESPSLNL LTDSFQSAFN KWNSGADDYQ HHFHVSVASV TSQWLLKYIL FSVPYLHTNW
401: LKGKGTSPYE TSHVMAERHR REKLNERFLI LRSMVPSVTR MDKASILGDT IEYIKQLRDK IESLEARKRL TGKRRMRQVE VSIIESEALL EVECVHREGL
501: LLDLMTKLRE LGVEVMMVQS WVKDDGVFVA EMRAMVRENG NGIKASVIEV KNALNQIIPR HEPYTLASSD HF
001: MDESSIIPAE KVAGAEKKEL QGLLKTAVQS VDWTYSVFWQ FCPQQRVLVW GNGYYNGAIK TRKTTQPAEV TAEEAALERS QQLRELYETL LAGESTSEAR
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
Arabidopsis Description
TT8Transcription factor TT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.