Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40047 | Soybean | nucleus | 77.49 | 75.85 |
| KRH01212 | Soybean | nucleus | 61.47 | 75.13 |
| KRH40049 | Soybean | nucleus | 71.0 | 69.2 |
| KRH40053 | Soybean | nucleus | 69.7 | 68.51 |
| VIT_02s0033g00370.t01 | Wine grape | nucleus | 27.27 | 67.02 |
| CDY72660 | Canola | nucleus | 34.63 | 61.07 |
| AT1G66380.1 | Thale cress | nucleus | 36.36 | 60.43 |
| VIT_02s0033g00450.t01 | Wine grape | nucleus | 38.53 | 56.33 |
| KRH40048 | Soybean | cytosol | 25.11 | 55.77 |
| CDY72006 | Canola | nucleus | 38.96 | 51.43 |
| KRG93566 | Soybean | nucleus | 51.95 | 47.43 |
| VIT_14s0006g01280.t01 | Wine grape | nucleus | 48.05 | 45.68 |
| VIT_02s0033g00400.t01 | Wine grape | nucleus | 43.29 | 44.64 |
| VIT_02s0033g00430.t01 | Wine grape | nucleus | 42.86 | 44.2 |
| VIT_14s0006g01290.t01 | Wine grape | nucleus | 46.32 | 44.03 |
| VIT_02s0033g00460.t01 | Wine grape | mitochondrion | 35.93 | 41.71 |
| VIT_02s0033g00410.t01 | Wine grape | nucleus | 45.02 | 41.6 |
| CDY70737 | Canola | nucleus | 40.26 | 40.79 |
| CDY49630 | Canola | nucleus | 41.56 | 40.17 |
| CDX96151 | Canola | nucleus | 42.86 | 40.08 |
| Bra004162.1-P | Field mustard | nucleus | 42.86 | 40.08 |
| AT1G66390.1 | Thale cress | nucleus | 42.86 | 39.76 |
| VIT_14s0006g01340.t01 | Wine grape | nucleus | 41.13 | 39.75 |
| Solyc10g086270.1.1 | Tomato | nucleus | 44.16 | 39.38 |
| KRH49229 | Soybean | nucleus | 38.1 | 38.94 |
| AT1G66370.1 | Thale cress | nucleus | 41.13 | 38.62 |
| VIT_02s0033g00390.t01 | Wine grape | nucleus | 44.16 | 38.49 |
| AT1G56650.1 | Thale cress | nucleus | 41.13 | 38.31 |
| CDY55040 | Canola | nucleus | 41.13 | 38.15 |
| KRH00082 | Soybean | nucleus | 37.23 | 38.05 |
| CDY58386 | Canola | nucleus, plastid | 40.69 | 37.75 |
| Bra039763.1-P | Field mustard | nucleus | 40.69 | 37.75 |
| Bra001917.1-P | Field mustard | nucleus | 40.69 | 37.75 |
| Solyc10g086290.1.1 | Tomato | nucleus | 42.42 | 36.98 |
| Solyc10g086260.1.1 | Tomato | nucleus | 42.86 | 36.13 |
| Solyc10g086250.1.1 | Tomato | nucleus | 42.86 | 36.0 |
| CDY53214 | Canola | nucleus | 38.53 | 32.13 |
| KRH21221 | Soybean | nucleus | 27.71 | 27.23 |
| PGSC0003DMT400036281 | Potato | extracellular | 20.35 | 22.6 |
| PGSC0003DMT400036284 | Potato | nucleus | 17.75 | 19.34 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100792465 | MapMan:15.5.2.1 | EMBL:ACUP02011508 | EnsemblPlantsGene:GLYMA_18G262000 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1N4F9 | InterPro:IPR017930 | EnsemblPlants:KRH01217 | ProteinID:KRH01217 |
| ProteinID:KRH01217.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF526 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000294D521 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr18:-:54788366..54790419
Molecular Weight (calculated)
26673.6 Da
IEP (calculated)
9.707
GRAVY (calculated)
-0.776
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSGVRKG AWSQFEDDLL RDCVNLHGEG KWHLVPQRAG LNRCRKSCRL RWLNYLKPNI KRGDFNEDEV DLMIRLHKLL GNRWSLIAGR LPGRTSNDVK
101: NYWNAYMRRK VHSHNKDNKI KKQETKSTVK PHEVIKPIPR VLTKTSPWLQ RKFINSPKVG VSEEGATSSE NWWETLLADK EDNAVFNNNN NTCFFGGVHG
201: ELNLWNEELT SIDFDFVTQG ELGGIVNFQN P
101: NYWNAYMRRK VHSHNKDNKI KKQETKSTVK PHEVIKPIPR VLTKTSPWLQ RKFINSPKVG VSEEGATSSE NWWETLLADK EDNAVFNNNN NTCFFGGVHG
201: ELNLWNEELT SIDFDFVTQG ELGGIVNFQN P
001: MEGSSKGLRK GAWTTEEDSL LRQCINKYGE GKWHQVPVRA GLNRCRKSCR LRWLNYLKPS IKRGKLSSDE VDLLLRLHRL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN
201: MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD
101: KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN
201: MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD
Arabidopsis Description
MYB75Transcription factor MYB75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.