Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72660 | Canola | nucleus | 46.77 | 88.55 |
| AT1G66380.1 | Thale cress | nucleus | 48.39 | 86.33 |
| AT1G66390.1 | Thale cress | nucleus | 79.03 | 78.71 |
| Bra039763.1-P | Field mustard | nucleus | 77.82 | 77.51 |
| CDY58386 | Canola | nucleus, plastid | 77.42 | 77.11 |
| CDY55040 | Canola | nucleus | 77.02 | 76.71 |
| CDY72006 | Canola | nucleus | 53.63 | 76.0 |
| Bra001917.1-P | Field mustard | nucleus | 76.21 | 75.9 |
| CDX96151 | Canola | nucleus | 71.77 | 72.06 |
| Bra004162.1-P | Field mustard | nucleus | 71.37 | 71.66 |
| CDY49630 | Canola | nucleus | 68.15 | 70.71 |
| CDY70737 | Canola | nucleus | 64.11 | 69.74 |
| AT1G66370.1 | Thale cress | nucleus | 65.32 | 65.85 |
| VIT_02s0033g00370.t01 | Wine grape | nucleus | 23.39 | 61.7 |
| CDY53214 | Canola | nucleus | 68.15 | 61.01 |
| VIT_02s0033g00450.t01 | Wine grape | nucleus | 38.31 | 60.13 |
| KRH01212 | Soybean | nucleus | 37.9 | 49.74 |
| VIT_14s0006g01280.t01 | Wine grape | nucleus | 44.76 | 45.68 |
| VIT_14s0006g01290.t01 | Wine grape | nucleus | 43.55 | 44.44 |
| VIT_02s0033g00400.t01 | Wine grape | nucleus | 38.31 | 42.41 |
| VIT_02s0033g00430.t01 | Wine grape | nucleus | 37.5 | 41.52 |
| Solyc10g086250.1.1 | Tomato | nucleus | 45.97 | 41.45 |
| KRH01217 | Soybean | nucleus | 38.31 | 41.13 |
| KRH40047 | Soybean | nucleus | 39.11 | 41.1 |
| KRH40049 | Soybean | nucleus | 39.11 | 40.93 |
| KRH40053 | Soybean | nucleus | 38.31 | 40.43 |
| Solyc10g086270.1.1 | Tomato | nucleus | 41.94 | 40.15 |
| VIT_02s0033g00410.t01 | Wine grape | nucleus | 40.32 | 40.0 |
| VIT_14s0006g01340.t01 | Wine grape | nucleus | 38.31 | 39.75 |
| Solyc10g086260.1.1 | Tomato | nucleus | 43.55 | 39.42 |
| VIT_02s0033g00390.t01 | Wine grape | nucleus | 41.13 | 38.49 |
| Solyc10g086290.1.1 | Tomato | nucleus | 41.13 | 38.49 |
| VIT_02s0033g00460.t01 | Wine grape | mitochondrion | 30.24 | 37.69 |
| KRG93566 | Soybean | nucleus | 37.9 | 37.15 |
| PGSC0003DMT400036284 | Potato | nucleus | 22.18 | 25.94 |
| PGSC0003DMT400036281 | Potato | extracellular | 21.37 | 25.48 |
| KRH21221 | Soybean | nucleus | 19.35 | 20.43 |
| KRH40048 | Soybean | cytosol | 5.65 | 13.46 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:842120 | ProteinID:AAG09100.1 | ProteinID:AAG42001.1 | ProteinID:ABB03877.1 |
| ProteinID:ABB03878.1 | ProteinID:ABB03879.1 | ProteinID:AEE33419.1 | EMBL:AF062908 | EMBL:AK221639 | ArrayExpress:AT1G56650 |
| EnsemblPlantsGene:AT1G56650 | RefSeq:AT1G56650 | TAIR:AT1G56650 | RefSeq:AT1G56650-TAIR-G | EnsemblPlants:AT1G56650.1 | TAIR:AT1G56650.1 |
| EMBL:AY519563 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0002239 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 |
| GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009718 | GO:GO:0009719 |
| GO:GO:0009723 | GO:GO:0009733 | GO:GO:0009745 | GO:GO:0009753 | GO:GO:0009867 | GO:GO:0009987 |
| GO:GO:0019430 | GO:GO:0030154 | GO:GO:0031540 | GO:GO:0031542 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_176057.1 | Symbol:PAP1 | PFAM:PF00249 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009047 |
| PO:PO:0020100 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF526 | UniProt:Q9FE25 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A7EEF | SEG:seg | : |
Description
MYB75Transcription factor MYB75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE25]
Coordinates
chr1:-:21233555..21235292
Molecular Weight (calculated)
28471.2 Da
IEP (calculated)
9.440
GRAVY (calculated)
-0.710
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSKGLRK GAWTTEEDSL LRQCINKYGE GKWHQVPVRA GLNRCRKSCR LRWLNYLKPS IKRGKLSSDE VDLLLRLHRL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN
201: MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD
101: KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN
201: MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.