Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01212 | Soybean | nucleus | 67.09 | 84.13 |
| KRH40048 | Soybean | cytosol | 35.02 | 79.81 |
| KRH40053 | Soybean | nucleus | 75.53 | 76.17 |
| KRH40047 | Soybean | nucleus | 75.11 | 75.42 |
| KRH01217 | Soybean | nucleus | 69.2 | 71.0 |
| VIT_02s0033g00370.t01 | Wine grape | nucleus | 24.89 | 62.77 |
| AT1G66380.1 | Thale cress | nucleus | 35.87 | 61.15 |
| CDY72660 | Canola | nucleus | 33.76 | 61.07 |
| VIT_02s0033g00450.t01 | Wine grape | nucleus | 36.29 | 54.43 |
| CDY72006 | Canola | nucleus | 36.71 | 49.71 |
| KRG93566 | Soybean | nucleus | 51.9 | 48.62 |
| VIT_14s0006g01280.t01 | Wine grape | nucleus | 47.26 | 46.09 |
| VIT_02s0033g00430.t01 | Wine grape | nucleus | 42.19 | 44.64 |
| VIT_14s0006g01290.t01 | Wine grape | nucleus | 45.57 | 44.44 |
| VIT_02s0033g00400.t01 | Wine grape | nucleus | 41.77 | 44.2 |
| KRH00082 | Soybean | nucleus | 40.51 | 42.48 |
| VIT_02s0033g00410.t01 | Wine grape | nucleus | 44.3 | 42.0 |
| VIT_02s0033g00460.t01 | Wine grape | mitochondrion | 35.02 | 41.71 |
| KRH49229 | Soybean | nucleus | 39.24 | 41.15 |
| CDY70737 | Canola | nucleus | 38.82 | 40.35 |
| VIT_14s0006g01340.t01 | Wine grape | nucleus | 40.51 | 40.17 |
| AT1G66390.1 | Thale cress | nucleus | 41.77 | 39.76 |
| CDY49630 | Canola | nucleus | 40.08 | 39.75 |
| Solyc10g086270.1.1 | Tomato | nucleus | 43.04 | 39.38 |
| Bra004162.1-P | Field mustard | nucleus | 40.93 | 39.27 |
| CDX96151 | Canola | nucleus | 40.93 | 39.27 |
| AT1G56650.1 | Thale cress | nucleus | 40.93 | 39.11 |
| Bra001917.1-P | Field mustard | nucleus | 40.93 | 38.96 |
| Solyc10g086250.1.1 | Tomato | nucleus | 45.15 | 38.91 |
| AT1G66370.1 | Thale cress | nucleus | 40.08 | 38.62 |
| CDY58386 | Canola | nucleus, plastid | 40.51 | 38.55 |
| CDY55040 | Canola | nucleus | 40.51 | 38.55 |
| Bra039763.1-P | Field mustard | nucleus | 40.08 | 38.15 |
| VIT_02s0033g00390.t01 | Wine grape | nucleus | 42.19 | 37.74 |
| Solyc10g086290.1.1 | Tomato | nucleus | 42.19 | 37.74 |
| Solyc10g086260.1.1 | Tomato | nucleus | 42.62 | 36.86 |
| CDY53214 | Canola | nucleus | 38.4 | 32.85 |
| KRH21221 | Soybean | nucleus | 26.16 | 26.38 |
| PGSC0003DMT400036284 | Potato | nucleus | 21.94 | 24.53 |
| PGSC0003DMT400036281 | Potato | extracellular | 19.83 | 22.6 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100780023 | MapMan:15.5.2.1 | EMBL:ACUP02006014 | ProteinID:BAS50198.1 | ProteinID:BAS50199.1 |
| EnsemblPlantsGene:GLYMA_09G235100 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7LFP2 |
| EnsemblPlants:KRH40049 | ProteinID:KRH40049 | ProteinID:KRH40049.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF526 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002338464 |
Description
hypothetical protein
Coordinates
chr9:+:45758471..45760482
Molecular Weight (calculated)
26937.8 Da
IEP (calculated)
7.905
GRAVY (calculated)
-0.737
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSGVRKG TWSQIEDDLL KACVQLYGEG NWHLVPKRAG LNRCRKSCRL RWLNYLKPNI KRGDFSEDEI DMMIRLHKLL GNRWSLIAGR LPGRTSNDVK
101: NYWNTYARRK LHSHKKDNNI EKQARAKTTV KPHEVIKPVP RALTKTSPRL QGKFINSSEV GVSHEEGATS ISGSGNWWET FLDDKEDIEE GNNNKCFFGG
201: EDGALDLWGE ELNSIACDFL TQGETWSDFL LDLGLGD
101: NYWNTYARRK LHSHKKDNNI EKQARAKTTV KPHEVIKPVP RALTKTSPRL QGKFINSSEV GVSHEEGATS ISGSGNWWET FLDDKEDIEE GNNNKCFFGG
201: EDGALDLWGE ELNSIACDFL TQGETWSDFL LDLGLGD
001: MGESPKGLRK GTWTTEEDIL LRQCIDKYGE GKWHRVPLRT GLNRCRKSCR LRWLNYLKPS IKRGKLCSDE VDLVLRLHKL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHDERCCKTK MINKNITSHP TSSAQKIDVL KPRPRSFSDK NSCNDVNILP KVDVVPLHLG LNNNYVCESS ITCNKDEQKD KLININLLDG
201: DNMWWESLLE ADVLGPEATE TAKGVTLPLD FEQIWARFDE ETLELN
101: KNYWNTHLSK KHDERCCKTK MINKNITSHP TSSAQKIDVL KPRPRSFSDK NSCNDVNILP KVDVVPLHLG LNNNYVCESS ITCNKDEQKD KLININLLDG
201: DNMWWESLLE ADVLGPEATE TAKGVTLPLD FEQIWARFDE ETLELN
Arabidopsis Description
MYB113Transcription factor MYB113 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.