Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01212 | Soybean | nucleus | 64.68 | 80.42 |
| KRH40047 | Soybean | nucleus | 78.72 | 78.39 |
| KRH40049 | Soybean | nucleus | 76.17 | 75.53 |
| KRH01217 | Soybean | nucleus | 68.51 | 69.7 |
| VIT_02s0033g00370.t01 | Wine grape | nucleus | 25.53 | 63.83 |
| KRH40048 | Soybean | cytosol | 27.66 | 62.5 |
| AT1G66380.1 | Thale cress | nucleus | 36.17 | 61.15 |
| CDY72660 | Canola | nucleus | 34.04 | 61.07 |
| VIT_02s0033g00450.t01 | Wine grape | nucleus | 37.45 | 55.7 |
| CDY72006 | Canola | nucleus | 38.72 | 52.0 |
| KRG93566 | Soybean | nucleus | 52.34 | 48.62 |
| VIT_14s0006g01290.t01 | Wine grape | nucleus | 46.81 | 45.27 |
| VIT_14s0006g01280.t01 | Wine grape | nucleus | 46.38 | 44.86 |
| KRH00082 | Soybean | nucleus | 41.28 | 42.92 |
| VIT_02s0033g00400.t01 | Wine grape | nucleus | 40.85 | 42.86 |
| KRH49229 | Soybean | nucleus | 40.85 | 42.48 |
| VIT_02s0033g00430.t01 | Wine grape | nucleus | 40.43 | 42.41 |
| VIT_14s0006g01340.t01 | Wine grape | nucleus | 42.13 | 41.42 |
| Solyc10g086270.1.1 | Tomato | nucleus | 45.53 | 41.31 |
| VIT_02s0033g00410.t01 | Wine grape | nucleus | 43.83 | 41.2 |
| CDY49630 | Canola | nucleus | 41.28 | 40.59 |
| CDY70737 | Canola | nucleus | 39.15 | 40.35 |
| Bra001917.1-P | Field mustard | nucleus | 42.55 | 40.16 |
| AT1G66390.1 | Thale cress | nucleus | 42.55 | 40.16 |
| CDX96151 | Canola | nucleus | 42.13 | 40.08 |
| Bra004162.1-P | Field mustard | nucleus | 41.7 | 39.68 |
| AT1G66370.1 | Thale cress | nucleus | 41.28 | 39.43 |
| Solyc10g086260.1.1 | Tomato | nucleus | 45.96 | 39.42 |
| CDY55040 | Canola | nucleus | 41.7 | 39.36 |
| CDY58386 | Canola | nucleus, plastid | 41.7 | 39.36 |
| VIT_02s0033g00460.t01 | Wine grape | mitochondrion | 33.19 | 39.2 |
| Bra039763.1-P | Field mustard | nucleus | 41.28 | 38.96 |
| Solyc10g086250.1.1 | Tomato | nucleus | 45.11 | 38.55 |
| VIT_02s0033g00390.t01 | Wine grape | nucleus | 43.4 | 38.49 |
| AT1G56650.1 | Thale cress | nucleus | 40.43 | 38.31 |
| Solyc10g086290.1.1 | Tomato | nucleus | 42.98 | 38.11 |
| CDY53214 | Canola | nucleus | 40.43 | 34.3 |
| KRH21221 | Soybean | nucleus | 25.53 | 25.53 |
| PGSC0003DMT400036284 | Potato | nucleus | 20.85 | 23.11 |
| PGSC0003DMT400036281 | Potato | extracellular | 20.0 | 22.6 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100781091 | MapMan:15.5.2.1 | EMBL:ACUP02006014 | EnsemblPlantsGene:GLYMA_09G235300 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7LFP3 | EnsemblPlants:KRH40053 | ProteinID:KRH40053 |
| ProteinID:KRH40053.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF526 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002338465 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:45780293..45781784
Molecular Weight (calculated)
26815.8 Da
IEP (calculated)
8.797
GRAVY (calculated)
-0.735
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGPSSVRKG AWSKCEDDLL RACVQLYGEG KWHLVPQRAG LNRCRKSCRL RWLNYLKPNI KRGDFSEDEV DMMIRMHKLL GNRWSLIAGR LPGRTSNDVK
101: NYWNTYMRRK VYSHKKDNNV EKQADEAKST VQRHQVIKPI PRALTKTAPR LQGKLFNSSK VGVSEAAGAA SSGSGNWWET LLENKKDNHE GNIINNTCFF
201: GGADGELDLW DEELNPIACD FLSEGENWSD FLLDL
101: NYWNTYMRRK VYSHKKDNNV EKQADEAKST VQRHQVIKPI PRALTKTAPR LQGKLFNSSK VGVSEAAGAA SSGSGNWWET LLENKKDNHE GNIINNTCFF
201: GGADGELDLW DEELNPIACD FLSEGENWSD FLLDL
001: MGESPKGLRK GTWTTEEDIL LRQCIDKYGE GKWHRVPLRT GLNRCRKSCR LRWLNYLKPS IKRGKLCSDE VDLVLRLHKL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHDERCCKTK MINKNITSHP TSSAQKIDVL KPRPRSFSDK NSCNDVNILP KVDVVPLHLG LNNNYVCESS ITCNKDEQKD KLININLLDG
201: DNMWWESLLE ADVLGPEATE TAKGVTLPLD FEQIWARFDE ETLELN
101: KNYWNTHLSK KHDERCCKTK MINKNITSHP TSSAQKIDVL KPRPRSFSDK NSCNDVNILP KVDVVPLHLG LNNNYVCESS ITCNKDEQKD KLININLLDG
201: DNMWWESLLE ADVLGPEATE TAKGVTLPLD FEQIWARFDE ETLELN
Arabidopsis Description
MYB113Transcription factor MYB113 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.