CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49229	Soybean	nucleus	70.35	70.35
KRH01212	Soybean	nucleus	38.94	46.56
KRH40053	Soybean	nucleus	42.92	41.28
KRH40049	Soybean	nucleus	42.48	40.51
KRH40047	Soybean	nucleus	42.04	40.25
KRH01217	Soybean	nucleus	38.05	37.23
VIT_01s0011g01200.t01	Wine grape	nucleus	31.86	34.62
KRG93566	Soybean	nucleus	38.5	34.39
VIT_01s0011g01190.t01	Wine grape	nucleus	32.3	33.03
KRH21221	Soybean	nucleus	19.47	18.72
KRH40048	Soybean	cytosol	5.31	11.54

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100798101	MapMan:15.5.2.1	EMBL:ACUP02011376	EnsemblPlantsGene:GLYMA_18G191200	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:I1N2Q1	InterPro:IPR017930	EnsemblPlants:KRH00082	ProteinID:KRH00082
ProteinID:KRH00082.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF952
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0001D84393	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:+:46166132..46168452

Molecular Weight (calculated)

25887.8 Da

IEP (calculated)

7.019

GRAVY (calculated)

-0.680

Length

226 amino acids

Sequence
(BLAST)

001: MGGVAWTEEE DHLLKKCIQQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIKRGNFA EEEVEMIIKL HKLLGNRWSL IAGRLPGRTA NDVKNYWNCH
101: LSKKLNVIEA EDRPITRDVQ VIRPQPRNIV GSSSVKRRGQ NESPTDKGVQ QESSMSSLTF DTADGQNHML DSQQDNNIYA CLDQQGIVSE LSMDFQFEGF
201: GAMMNGEGSS SQWDWGDLLL DMDLYK

Best Arabidopsis Sequence Match ( AT1G66370.1 )
(BLAST)

001: MGESPKGLRK GTWTTEEDIL LRQCIDKYGE GKWHRVPLRT GLNRCRKSCR LRWLNYLKPS IKRGKLCSDE VDLVLRLHKL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHDERCCKTK MINKNITSHP TSSAQKIDVL KPRPRSFSDK NSCNDVNILP KVDVVPLHLG LNNNYVCESS ITCNKDEQKD KLININLLDG
201: DNMWWESLLE ADVLGPEATE TAKGVTLPLD FEQIWARFDE ETLELN

Arabidopsis Description

MYB113Transcription factor MYB113 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.