CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00082	Soybean	nucleus	70.35	70.35
KRH01212	Soybean	nucleus	38.05	45.5
KRH40053	Soybean	nucleus	42.48	40.85
KRH40047	Soybean	nucleus	42.48	40.68
KRH40049	Soybean	nucleus	41.15	39.24
KRH01217	Soybean	nucleus	38.94	38.1
KRG93566	Soybean	nucleus	40.27	35.97
VIT_01s0011g01200.t01	Wine grape	nucleus	32.3	35.1
VIT_01s0011g01190.t01	Wine grape	nucleus	30.53	31.22
KRH21221	Soybean	nucleus	21.24	20.43
KRH40048	Soybean	cytosol	4.42	9.62

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100809746	MapMan:15.5.2.1	EMBL:ACUP02004342	EnsemblPlantsGene:GLYMA_07G141100	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:I1KK72	InterPro:IPR017930	EnsemblPlants:KRH49229	ProteinID:KRH49229
ProteinID:KRH49229.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF952
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002338EEA	:	:

Description

hypothetical protein

Coordinates

chr7:+:16727963..16729613

Molecular Weight (calculated)

25942.6 Da

IEP (calculated)

6.039

GRAVY (calculated)

-0.733

Length

226 amino acids

Sequence
(BLAST)

001: MGGVAWTEEE DHLLKKCIQQ YGEGKWHRVP ILAGLNRCRK SCRLRWLNYL RPNIKRGNFA EEEVEMIIKL HKLLGNRWSL IAGRLPGRTA NDVKNYWNCH
101: LSKRLNALEA EDRPITRDVQ VIRPQPRNIG SSSVKRRGGQ NESATDKGVQ QESSMSSLTF DASDGQNHML ESQQDNDIYA CLDQQGIVSE LSMDFQLQGF
201: EAMMNGEGSS SQWDWGDYLL DMDFYE

Best Arabidopsis Sequence Match ( AT1G56650.1 )
(BLAST)

001: MEGSSKGLRK GAWTTEEDSL LRQCINKYGE GKWHQVPVRA GLNRCRKSCR LRWLNYLKPS IKRGKLSSDE VDLLLRLHRL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN
201: MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD

Arabidopsis Description

MYB75Transcription factor MYB75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.