Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40053 | Soybean | nucleus | 78.39 | 78.72 |
| KRH01212 | Soybean | nucleus | 62.71 | 78.31 |
| KRH01217 | Soybean | nucleus | 75.85 | 77.49 |
| KRH40049 | Soybean | nucleus | 75.42 | 75.11 |
| VIT_02s0033g00370.t01 | Wine grape | nucleus | 26.69 | 67.02 |
| CDY72660 | Canola | nucleus | 35.17 | 63.36 |
| AT1G66380.1 | Thale cress | nucleus | 36.86 | 62.59 |
| KRH40048 | Soybean | cytosol | 27.54 | 62.5 |
| VIT_02s0033g00450.t01 | Wine grape | nucleus | 38.14 | 56.96 |
| CDY72006 | Canola | nucleus | 38.98 | 52.57 |
| KRG93566 | Soybean | nucleus | 52.97 | 49.41 |
| VIT_14s0006g01290.t01 | Wine grape | nucleus | 47.88 | 46.5 |
| VIT_14s0006g01280.t01 | Wine grape | nucleus | 47.88 | 46.5 |
| VIT_02s0033g00400.t01 | Wine grape | nucleus | 41.95 | 44.2 |
| VIT_02s0033g00430.t01 | Wine grape | nucleus | 41.53 | 43.75 |
| CDY70737 | Canola | nucleus | 41.1 | 42.54 |
| KRH49229 | Soybean | nucleus | 40.68 | 42.48 |
| Solyc10g086270.1.1 | Tomato | nucleus | 46.61 | 42.47 |
| VIT_14s0006g01340.t01 | Wine grape | nucleus | 42.8 | 42.26 |
| KRH00082 | Soybean | nucleus | 40.25 | 42.04 |
| CDY49630 | Canola | nucleus | 42.37 | 41.84 |
| Bra004162.1-P | Field mustard | nucleus | 43.64 | 41.7 |
| CDX96151 | Canola | nucleus | 43.64 | 41.7 |
| VIT_02s0033g00410.t01 | Wine grape | nucleus | 44.07 | 41.6 |
| VIT_02s0033g00460.t01 | Wine grape | mitochondrion | 34.32 | 40.7 |
| AT1G66390.1 | Thale cress | nucleus | 42.37 | 40.16 |
| Bra001917.1-P | Field mustard | nucleus | 41.95 | 39.76 |
| CDY55040 | Canola | nucleus | 41.53 | 39.36 |
| Solyc10g086250.1.1 | Tomato | nucleus | 45.76 | 39.27 |
| VIT_02s0033g00390.t01 | Wine grape | nucleus | 44.07 | 39.25 |
| AT1G56650.1 | Thale cress | nucleus | 41.1 | 39.11 |
| Solyc10g086260.1.1 | Tomato | nucleus | 45.34 | 39.05 |
| Bra039763.1-P | Field mustard | nucleus | 41.1 | 38.96 |
| CDY58386 | Canola | nucleus, plastid | 41.1 | 38.96 |
| Solyc10g086290.1.1 | Tomato | nucleus | 43.64 | 38.87 |
| AT1G66370.1 | Thale cress | nucleus | 39.41 | 37.8 |
| CDY53214 | Canola | nucleus | 39.83 | 33.94 |
| KRH21221 | Soybean | nucleus | 27.54 | 27.66 |
| PGSC0003DMT400036284 | Potato | nucleus | 21.19 | 23.58 |
| PGSC0003DMT400036281 | Potato | extracellular | 19.49 | 22.12 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100778957 | MapMan:15.5.2.1 | UniProt:A0A0R0IMD6 | EMBL:ACUP02006014 | EnsemblPlantsGene:GLYMA_09G234900 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH40047 | ProteinID:KRH40047 |
| ProteinID:KRH40047.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF526 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002338463 | : | : |
Description
hypothetical protein
Coordinates
chr9:+:45736363..45737633
Molecular Weight (calculated)
26885.6 Da
IEP (calculated)
8.228
GRAVY (calculated)
-0.736
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSGVRKG AWSQIEDNLL RDCVNLHGEG KWHLVPKRAG LNRCRKSCRL RWLNYLKPNI KRGDFSEDEV DLMIRLHKLL GNRWSLIAGR LPGRTSNDVK
101: NYWNTYMRRK VHSHKKDNNI EKQADEAKPI VKHHEVIKPV PRTLSKTSPW LQGKFVNSSK VGVSEEGATS ISGSAGNWWE TLLDDKEDNA VNNNNTCFFG
201: GADGEFNLWS EELTSIDCDF VTQGESWSDF LLDLQG
101: NYWNTYMRRK VHSHKKDNNI EKQADEAKPI VKHHEVIKPV PRTLSKTSPW LQGKFVNSSK VGVSEEGATS ISGSAGNWWE TLLDDKEDNA VNNNNTCFFG
201: GADGEFNLWS EELTSIDCDF VTQGESWSDF LLDLQG
001: MEGSSKGLRK GAWTTEEDSL LRQCINKYGE GKWHQVPVRA GLNRCRKSCR LRWLNYLKPS IKRGKLSSDE VDLLLRLHRL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN
201: MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD
101: KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN
201: MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD
Arabidopsis Description
MYB75Transcription factor MYB75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.