Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40049 | Soybean | nucleus | 84.13 | 67.09 |
| KRH40053 | Soybean | nucleus | 80.42 | 64.68 |
| KRH40047 | Soybean | nucleus | 78.31 | 62.71 |
| CDY72660 | Canola | nucleus | 42.86 | 61.83 |
| VIT_02s0033g00370.t01 | Wine grape | nucleus | 30.69 | 61.7 |
| KRH01217 | Soybean | nucleus | 75.13 | 61.47 |
| AT1G66380.1 | Thale cress | nucleus | 43.92 | 59.71 |
| VIT_02s0033g00450.t01 | Wine grape | nucleus | 45.5 | 54.43 |
| CDY72006 | Canola | nucleus | 43.92 | 47.43 |
| KRH40048 | Soybean | cytosol | 25.93 | 47.12 |
| VIT_14s0006g01280.t01 | Wine grape | nucleus | 55.56 | 43.21 |
| KRG93566 | Soybean | nucleus | 57.14 | 42.69 |
| VIT_02s0033g00400.t01 | Wine grape | nucleus | 49.74 | 41.96 |
| VIT_14s0006g01290.t01 | Wine grape | nucleus | 53.44 | 41.56 |
| VIT_02s0033g00430.t01 | Wine grape | nucleus | 49.21 | 41.52 |
| KRH00082 | Soybean | nucleus | 46.56 | 38.94 |
| CDX96151 | Canola | nucleus | 50.79 | 38.87 |
| VIT_02s0033g00410.t01 | Wine grape | nucleus | 51.32 | 38.8 |
| CDY70737 | Canola | nucleus | 46.56 | 38.6 |
| AT1G66390.1 | Thale cress | nucleus | 50.79 | 38.55 |
| Bra004162.1-P | Field mustard | nucleus | 50.26 | 38.46 |
| Bra001917.1-P | Field mustard | nucleus | 50.26 | 38.15 |
| CDY58386 | Canola | nucleus, plastid | 50.26 | 38.15 |
| CDY55040 | Canola | nucleus | 50.26 | 38.15 |
| CDY49630 | Canola | nucleus | 48.15 | 38.08 |
| KRH49229 | Soybean | nucleus | 45.5 | 38.05 |
| AT1G56650.1 | Thale cress | nucleus | 49.74 | 37.9 |
| Bra039763.1-P | Field mustard | nucleus | 49.74 | 37.75 |
| VIT_14s0006g01340.t01 | Wine grape | nucleus | 47.62 | 37.66 |
| AT1G66370.1 | Thale cress | nucleus | 48.68 | 37.4 |
| Solyc10g086250.1.1 | Tomato | nucleus | 53.97 | 37.09 |
| Solyc10g086270.1.1 | Tomato | nucleus | 50.79 | 37.07 |
| VIT_02s0033g00460.t01 | Wine grape | mitochondrion | 38.62 | 36.68 |
| VIT_02s0033g00390.t01 | Wine grape | nucleus | 49.21 | 35.09 |
| Solyc10g086260.1.1 | Tomato | nucleus | 50.79 | 35.04 |
| Solyc10g086290.1.1 | Tomato | nucleus | 48.15 | 34.34 |
| CDY53214 | Canola | nucleus | 47.62 | 32.49 |
| KRH21221 | Soybean | nucleus | 32.28 | 25.96 |
| PGSC0003DMT400036284 | Potato | nucleus | 24.34 | 21.7 |
| PGSC0003DMT400036281 | Potato | extracellular | 22.22 | 20.19 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A0R0F4D4 | EMBL:ACUP02011507 | EnsemblPlantsGene:GLYMA_18G261700 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH01212 | ProteinID:KRH01212 | ProteinID:KRH01212.1 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF526 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0006ED612D | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:54764118..54765657
Molecular Weight (calculated)
21799.0 Da
IEP (calculated)
10.496
GRAVY (calculated)
-0.943
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGPSGVRKG AWTKCEDDLL RACVQLYGEG KWHLVPQRAG LNRCRKSRRL RWLNYLKPNI KRGDLSEDEV DMMIRMHKLL GNRWSLIAGR LPRRTSNDVK
101: NYWNTYMRRK VYSHKKDNNV EKQAEAKSTV KHHEVIKPVP RTLSKTSPWL QGKFFNSSKV GASGEGATSI SGSGNWWETL LDDKEDNEG
101: NYWNTYMRRK VYSHKKDNNV EKQAEAKSTV KHHEVIKPVP RTLSKTSPWL QGKFFNSSKV GASGEGATSI SGSGNWWETL LDDKEDNEG
001: MGESPKGLRK GTWTTEEDIL LRQCIDKYGE GKWHRVPLRT GLNRCRKSCR LRWLNYLKPS IKRGKLCSDE VDLVLRLHKL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHDERCCKTK MINKNITSHP TSSAQKIDVL KPRPRSFSDK NSCNDVNILP KVDVVPLHLG LNNNYVCESS ITCNKDEQKD KLININLLDG
201: DNMWWESLLE ADVLGPEATE TAKGVTLPLD FEQIWARFDE ETLELN
101: KNYWNTHLSK KHDERCCKTK MINKNITSHP TSSAQKIDVL KPRPRSFSDK NSCNDVNILP KVDVVPLHLG LNNNYVCESS ITCNKDEQKD KLININLLDG
201: DNMWWESLLE ADVLGPEATE TAKGVTLPLD FEQIWARFDE ETLELN
Arabidopsis Description
MYB113Transcription factor MYB113 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.