CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX86891
CDX99505
CDY08314
CDY25513
CDY34367
CDY72121

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G56650.1	CDY08314	AT1G63650.1	12917293
AT1G56650.1	CDY25513	AT1G63650.1	12917293
AT1G56650.1	CDY34367	AT1G63650.1	12917293
AT1G56650.1	CDY72121	AT1G63650.1	12917293
AT1G56650.1	CDY08314	AT1G63650.1	15361138
AT1G56650.1	CDY25513	AT1G63650.1	15361138
AT1G56650.1	CDY34367	AT1G63650.1	15361138
AT1G56650.1	CDY72121	AT1G63650.1	15361138
AT1G56650.1	CDX86891	AT4G09820.1	15361138
AT1G56650.1	CDX99505	AT4G09820.1	15361138
AT1G56650.1	CDX86891	AT4G09820.1	18532977
AT1G56650.1	CDX99505	AT4G09820.1	18532977
AT1G66370.1	CDY08314	AT1G63650.1	15361138
AT1G66370.1	CDY25513	AT1G63650.1	15361138
AT1G66370.1	CDY34367	AT1G63650.1	15361138
AT1G66370.1	CDY72121	AT1G63650.1	15361138
AT1G66370.1	CDX86891	AT4G09820.1	15361138
AT1G66370.1	CDX99505	AT4G09820.1	15361138
AT1G66380.1	CDY08314	AT1G63650.1	15361138
AT1G66380.1	CDY25513	AT1G63650.1	15361138
AT1G66380.1	CDY34367	AT1G63650.1	15361138
AT1G66380.1	CDY72121	AT1G63650.1	15361138
AT1G66380.1	CDX86891	AT4G09820.1	15361138
AT1G66380.1	CDX99505	AT4G09820.1	15361138
AT1G66390.1	CDY08314	AT1G63650.1	12917293
AT1G66390.1	CDY25513	AT1G63650.1	12917293
AT1G66390.1	CDY34367	AT1G63650.1	12917293
AT1G66390.1	CDY72121	AT1G63650.1	12917293
AT1G66390.1	CDY08314	AT1G63650.1	15361138
AT1G66390.1	CDY25513	AT1G63650.1	15361138
AT1G66390.1	CDY34367	AT1G63650.1	15361138
AT1G66390.1	CDY72121	AT1G63650.1	15361138
AT1G66390.1	CDX86891	AT4G09820.1	15361138
AT1G66390.1	CDX99505	AT4G09820.1	15361138

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G66380.1	Thale cress	nucleus	87.79	82.73
CDY72006	Canola	nucleus	87.79	65.71
VIT_02s0033g00370.t01	Wine grape	nucleus	44.27	61.7
VIT_02s0033g00450.t01	Wine grape	nucleus	67.18	55.7
Bra001917.1-P	Field mustard	nucleus	99.24	52.21
CDY70737	Canola	nucleus	88.55	50.88
CDY49630	Canola	nucleus	87.02	47.7
CDY55040	Canola	nucleus	89.31	46.99
CDX96151	Canola	nucleus	88.55	46.96
AT1G56650.1	Thale cress	nucleus	88.55	46.77
AT1G66390.1	Thale cress	nucleus	88.55	46.59
CDY58386	Canola	nucleus, plastid	88.55	46.59
CDY53214	Canola	nucleus	97.71	46.21
AT1G66370.1	Thale cress	nucleus	81.68	43.5
KRH01212	Soybean	nucleus	61.83	42.86
VIT_02s0033g00430.t01	Wine grape	nucleus	64.89	37.95
VIT_02s0033g00400.t01	Wine grape	nucleus	64.89	37.95
VIT_14s0006g01280.t01	Wine grape	nucleus	70.23	37.86
VIT_14s0006g01290.t01	Wine grape	nucleus	68.7	37.04
KRH40047	Soybean	nucleus	63.36	35.17
KRH01217	Soybean	nucleus	61.07	34.63
VIT_02s0033g00410.t01	Wine grape	nucleus	65.65	34.4
KRH40053	Soybean	nucleus	61.07	34.04
KRH40049	Soybean	nucleus	61.07	33.76
VIT_02s0033g00460.t01	Wine grape	mitochondrion	51.15	33.67
Solyc10g086290.1.1	Tomato	nucleus	67.18	33.21
Solyc10g086270.1.1	Tomato	nucleus	65.65	33.2
VIT_14s0006g01340.t01	Wine grape	nucleus	60.31	33.05
Solyc10g086250.1.1	Tomato	nucleus	68.7	32.73
VIT_02s0033g00390.t01	Wine grape	nucleus	65.65	32.45
Solyc10g086260.1.1	Tomato	nucleus	67.18	32.12
KRG93566	Soybean	nucleus	61.07	31.62
PGSC0003DMT400036281	Potato	extracellular	28.24	17.79
KRH21221	Soybean	nucleus	29.77	16.6
PGSC0003DMT400036284	Potato	nucleus	22.14	13.68
KRH40048	Soybean	cytosol	2.29	2.88

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:A0A078K1L9	UniProt:A0A078K1L9	EnsemblPlants:CDY72660	ProteinID:CDY72660
ProteinID:CDY72660.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	EnsemblPlantsGene:GSBRNA2T00034307001
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF526	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0004EE3687	SEG:seg

Description

BnaAnng41910DBnaAnng41910D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K1L9]

Coordinates

chrLK052511:-:1..1224

Molecular Weight (calculated)

15211.5 Da

IEP (calculated)

10.826

GRAVY (calculated)

-0.834

Length

131 amino acids

Sequence
(BLAST)

001: MEDSSKGLTK GAWTAEEDSL LRRCIDKYGE GKWHQVPLRA GLNRCRKSCR LRWLNYLKPT IKRGKLSSDE VDLLLRLHKL LGNRWSLIAG RLPGRTANDI
101: KNYWNTHLSK KHEPCCKTKM KKRNVTFSST T

Best Arabidopsis Sequence Match ( AT1G56650.1 )
(BLAST)

001: MEGSSKGLRK GAWTTEEDSL LRQCINKYGE GKWHQVPVRA GLNRCRKSCR LRWLNYLKPS IKRGKLSSDE VDLLLRLHRL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN
201: MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD

Arabidopsis Description

MYB75Transcription factor MYB75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.