Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G22760.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77195 | Soybean | nucleus | 83.71 | 71.2 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 19.81 | 49.21 |
| KRH58189 | Soybean | nucleus | 55.27 | 45.29 |
| KRH04346 | Soybean | nucleus | 52.4 | 44.2 |
| KRH40248 | Soybean | cytosol | 18.85 | 40.97 |
| KRH09683 | Soybean | nucleus | 33.23 | 39.69 |
| KRH47401 | Soybean | nucleus | 24.6 | 37.93 |
| KRH77193 | Soybean | nucleus | 39.62 | 37.8 |
| KRH23623 | Soybean | nucleus | 25.88 | 37.16 |
| KRH44509 | Soybean | nucleus | 24.92 | 36.62 |
| KRH23621 | Soybean | nucleus | 33.87 | 36.43 |
| KRH23624 | Soybean | nucleus | 32.91 | 36.27 |
| KRH04347 | Soybean | nucleus | 38.34 | 35.19 |
| KRH09685 | Soybean | cytosol | 32.91 | 34.8 |
| KRH49880 | Soybean | nucleus | 35.78 | 34.04 |
| KRH58187 | Soybean | endoplasmic reticulum | 36.42 | 33.93 |
| KRH28296 | Soybean | nucleus | 36.42 | 32.66 |
| CDY52593 | Canola | nucleus | 29.39 | 32.28 |
| KRH21680 | Soybean | nucleus, vacuole | 38.66 | 32.18 |
| CDY13735 | Canola | nucleus | 29.71 | 32.18 |
| Bra039926.1-P | Field mustard | nucleus | 29.71 | 32.07 |
| KRH10664 | Soybean | nucleus | 37.7 | 31.98 |
| KRH42021 | Soybean | nucleus | 19.81 | 31.79 |
| KRH44511 | Soybean | nucleus | 33.23 | 31.71 |
| KRH04348 | Soybean | nucleus | 37.7 | 31.64 |
| KRH47400 | Soybean | nucleus | 27.16 | 31.6 |
| KRH58186 | Soybean | nucleus | 36.42 | 31.58 |
| KRH77192 | Soybean | nucleus | 34.19 | 31.38 |
| KRH00979 | Soybean | nucleus | 30.35 | 31.25 |
| CDX89512 | Canola | nucleus | 29.39 | 31.08 |
| KRH44510 | Soybean | nucleus | 26.84 | 30.55 |
| AT2G22760.1 | Thale cress | nucleus | 28.75 | 30.51 |
| CDY25629 | Canola | nucleus | 29.07 | 30.33 |
| CDY52591 | Canola | nucleus | 30.35 | 30.16 |
| KRH66425 | Soybean | nucleus | 30.03 | 30.13 |
| Bra039927.1-P | Field mustard | nucleus | 30.35 | 30.06 |
| Bra030208.1-P | Field mustard | nucleus | 29.07 | 29.93 |
| KRH47399 | Soybean | nucleus | 32.59 | 29.91 |
| CDX89513 | Canola | nucleus | 30.99 | 29.85 |
| KRH48860 | Soybean | nucleus | 30.03 | 29.75 |
| AT2G22770.1 | Thale cress | nucleus | 30.03 | 29.38 |
| CDY25630 | Canola | nucleus | 30.35 | 29.23 |
| KRH66407 | Soybean | nucleus | 36.42 | 29.23 |
| Bra030207.1-P | Field mustard | nucleus | 30.35 | 29.14 |
| KRH48847 | Soybean | nucleus | 35.14 | 28.87 |
| KRH00981 | Soybean | nucleus | 29.71 | 28.62 |
| KRH48858 | Soybean | nucleus | 29.39 | 28.57 |
| KRH00980 | Soybean | nucleus | 18.21 | 28.08 |
| KRH47398 | Soybean | nucleus | 32.59 | 27.57 |
| KRH44512 | Soybean | nucleus | 32.59 | 27.2 |
| KRH40246 | Soybean | nucleus, vacuole | 21.41 | 24.81 |
| KRH75613 | Soybean | nucleus | 22.36 | 10.99 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 19.81 | 10.84 |
| KRH74418 | Soybean | nucleus | 22.04 | 10.75 |
| KRH45440 | Soybean | nucleus | 22.36 | 10.7 |
| KRH32008 | Soybean | extracellular, plastid | 22.36 | 10.54 |
| KRH71432 | Soybean | nucleus | 21.73 | 10.41 |
| KRH68922 | Soybean | nucleus | 18.21 | 10.36 |
| KRH06400 | Soybean | nucleus | 15.34 | 10.3 |
| KRH47834 | Soybean | nucleus | 15.02 | 10.13 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 18.85 | 10.03 |
| KRH32144 | Soybean | nucleus | 15.97 | 9.92 |
| KRH19522 | Soybean | nucleus | 15.65 | 9.68 |
| KRH05127 | Soybean | nucleus, plastid | 8.95 | 9.56 |
| KRG97199 | Soybean | nucleus | 18.21 | 9.21 |
| KRH47899 | Soybean | nucleus | 17.89 | 8.95 |
| KRH41187 | Soybean | nucleus | 17.89 | 8.89 |
| KRH59908 | Soybean | nucleus | 17.89 | 8.87 |
| KRH39540 | Soybean | nucleus | 20.45 | 8.76 |
| KRH06456 | Soybean | nucleus | 17.25 | 8.74 |
| KRH65046 | Soybean | nucleus | 15.34 | 7.42 |
| KRH48144 | Soybean | nucleus | 15.02 | 7.23 |
Protein Annotations
| EntrezGene:100776539 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02006743 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_11G043600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7LN10 | EnsemblPlants:KRH28295 | ProteinID:KRH28295 | ProteinID:KRH28295.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233D000 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:3217780..3220691
Molecular Weight (calculated)
35170.9 Da
IEP (calculated)
6.728
GRAVY (calculated)
-0.517
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDASEASWL SDLMLKETED CNLFRHSHLE TLLDDDDELL SHEIASAFEN LHQPLYSETF ERSTKQPKTN ASSSPSSPTS KILLSFDNSS DSAALSPNQI
101: KNKGVSVSVS LPQTRKRSSE NHNFQTESPK GPRSYKSPSY ARDHIIAERK RREKLSQSLI ALAALIPGLK KMDRASVLGN AIKYVKELQE RLRMLEEENK
201: VMVNKAKLSC EDDIDGSASR EDEEGSERLP RVEARVSEKD VLLRIHCQKQ KGLLLKILVE IQKFHLFVVS SSVLPFGDSI LDITIVAQME KGYNLTINDI
301: VKNLRVATLK SMS
101: KNKGVSVSVS LPQTRKRSSE NHNFQTESPK GPRSYKSPSY ARDHIIAERK RREKLSQSLI ALAALIPGLK KMDRASVLGN AIKYVKELQE RLRMLEEENK
201: VMVNKAKLSC EDDIDGSASR EDEEGSERLP RVEARVSEKD VLLRIHCQKQ KGLLLKILVE IQKFHLFVVS SSVLPFGDSI LDITIVAQME KGYNLTINDI
301: VKNLRVATLK SMS
001: MDEDFFLPDF SLVDIDFDFN IYEENNLSPD ESLSNSRRAD QSSKFDHQMH FECLREKPKA AVKPMMKINN KQQLISFDFS SNVISSPAAE EIIMDKLVGR
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
Arabidopsis Description
BHLH19Uncharacterized protein At2g22760 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.