Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039926.1-P | Field mustard | nucleus | 73.9 | 75.17 |
| CDY13735 | Canola | nucleus | 73.56 | 75.09 |
| CDY52593 | Canola | nucleus | 71.53 | 74.04 |
| CDY25629 | Canola | nucleus | 75.25 | 74.0 |
| CDX89512 | Canola | nucleus | 73.9 | 73.65 |
| Bra030208.1-P | Field mustard | nucleus | 75.25 | 73.03 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 18.31 | 42.86 |
| AT2G22770.1 | Thale cress | nucleus | 46.1 | 42.5 |
| AT4G37850.1 | Thale cress | nucleus | 32.54 | 29.27 |
| AT2G22750.3 | Thale cress | nucleus | 32.88 | 29.13 |
| KRH28295 | Soybean | nucleus | 30.51 | 28.75 |
| KRH77195 | Soybean | nucleus | 33.9 | 27.17 |
| KRH77192 | Soybean | nucleus | 31.19 | 26.98 |
| KRH28296 | Soybean | nucleus | 31.86 | 26.93 |
| KRH04348 | Soybean | nucleus | 32.2 | 25.47 |
| KRH58186 | Soybean | nucleus | 30.85 | 25.21 |
| KRH58189 | Soybean | nucleus | 30.85 | 23.82 |
| KRH04346 | Soybean | nucleus | 29.15 | 23.18 |
| AT4G00870.1 | Thale cress | nucleus, plastid | 15.93 | 11.11 |
| AT4G16430.1 | Thale cress | nucleus | 15.59 | 9.85 |
| AT4G09820.1 | Thale cress | nucleus | 16.27 | 9.27 |
| AT5G46760.1 | Thale cress | nucleus | 17.63 | 8.78 |
| AT5G46830.1 | Thale cress | nucleus | 14.92 | 8.61 |
| AT4G17880.1 | Thale cress | nucleus | 16.95 | 8.49 |
| AT1G01260.1 | Thale cress | nucleus | 16.61 | 8.31 |
| AT5G41315.2 | Thale cress | nucleus | 17.63 | 8.06 |
| AT1G63650.1 | Thale cress | nucleus | 16.27 | 8.05 |
| AT1G32640.1 | Thale cress | nucleus | 16.95 | 8.03 |
| AT2G46510.1 | Thale cress | nucleus | 13.9 | 7.24 |
| AT4G00480.2 | Thale cress | nucleus | 10.85 | 5.52 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EntrezGene:816806 | ProteinID:AAC63587.1 | ProteinID:AAM15235.1 |
| EMBL:AB493559 | ProteinID:AEC07351.1 | EMBL:AF488563 | ArrayExpress:AT2G22760 | EnsemblPlantsGene:AT2G22760 | RefSeq:AT2G22760 |
| TAIR:AT2G22760 | RefSeq:AT2G22760-TAIR-G | EnsemblPlants:AT2G22760.1 | TAIR:AT2G22760.1 | UniProt:C0SV56 | ncoils:Coil |
| EMBL:DQ446550 | EMBL:DQ653016 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| RefSeq:NP_001323557.1 | RefSeq:NP_179861.2 | PFAM:PF00010 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000033 |
| PO:PO:0000036 | PO:PO:0000051 | PO:PO:0000056 | PO:PO:0000112 | PO:PO:0000293 | PO:PO:0004006 |
| PO:PO:0004707 | PO:PO:0006016 | PO:PO:0006036 | PO:PO:0006040 | PO:PO:0006504 | PO:PO:0009005 |
| PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009053 | PO:PO:0009081 | PO:PO:0020127 | PO:PO:0020128 |
| PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | UniProt:Q1PF16 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0000196C15 | InterPro:bHLH_dom | : | : | : | : |
Description
BHLH19Uncharacterized protein At2g22760 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV56]
Coordinates
chr2:+:9677844..9679502
Molecular Weight (calculated)
33789.0 Da
IEP (calculated)
6.082
GRAVY (calculated)
-0.344
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEDFFLPDF SLVDIDFDFN IYEENNLSPD ESLSNSRRAD QSSKFDHQMH FECLREKPKA AVKPMMKINN KQQLISFDFS SNVISSPAAE EIIMDKLVGR
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.