Factsheet for AT4G00870.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 6
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P18910_001	Banana	nucleus	35.46	38.07
VIT_15s0048g02820.t01	Wine grape	nucleus	41.84	35.61
TraesCS5D01G313700.1	Wheat	nucleus	22.93	35.27
GSMUA_Achr9P20820_001	Banana	nucleus	30.26	34.78
HORVU5Hr1G080040.1	Barley	nucleus	21.99	34.7
TraesCSU01G222600.1	Wheat	nucleus	20.09	34.55
TraesCS2B01G469200.1	Wheat	nucleus	20.09	34.55
TraesCS5B01G306600.1	Wheat	nucleus	22.22	34.43
TraesCS5B01G307100.1	Wheat	nucleus	22.22	34.43
GSMUA_Achr10P...	Banana	nucleus	32.39	34.34
TraesCS5A01G306700.1	Wheat	peroxisome	22.22	34.31
Zm00001d031717_P001	Maize	nucleus	20.33	33.86
TraesCS5A01G306600.1	Wheat	nucleus	21.99	33.82
TraesCS2A01G448500.1	Wheat	nucleus	20.33	33.59
TraesCS7D01G102200.1	Wheat	nucleus	20.33	33.59
TraesCS2B01G469300.1	Wheat	nucleus	20.33	33.59
HORVU0Hr1G025420.1	Barley	cytosol, nucleus	13.0	33.54
TraesCS5A01G306200.1	Wheat	nucleus	21.99	33.33
TraesCS5D01G313400.1	Wheat	nucleus	21.51	33.33
TraesCS5B01G307000.1	Wheat	nucleus	21.75	32.97
TraesCS5D01G313600.1	Wheat	nucleus	21.75	32.97
HORVU5Hr1G080080.1	Barley	nucleus, plastid	16.31	32.86
TraesCS5A01G306500.1	Wheat	nucleus	21.75	32.74
TraesCS5D01G313500.1	Wheat	nucleus	21.51	32.62
Os09t0519100-00	Rice	nucleus	20.09	32.2
TraesCS5B01G306800.1	Wheat	nucleus	21.28	32.14
Os08t0543700-00	Rice	nucleus, peroxisome, plastid	19.86	31.94
KXG25462	Sorghum	nucleus	20.8	31.65
OQU80778	Sorghum	nucleus	19.86	31.11
TraesCS1B01G387900.1	Wheat	nucleus	17.49	30.96
TraesCS1D01G374800.1	Wheat	nucleus	19.39	30.94
Zm00001d052728_P001	Maize	nucleus	20.09	30.91
OQU80776	Sorghum	nucleus	19.15	30.8
OQU75588	Sorghum	nucleus	19.15	30.8
EER99201	Sorghum	nucleus	21.51	30.74
EER97058	Sorghum	cytosol, nucleus, plastid	19.86	30.43
Zm00001d021164_P001	Maize	nucleus	20.8	30.34
TraesCS1A01G369200.1	Wheat	nucleus	14.18	30.3
Zm00001d006150_P001	Maize	nucleus	20.8	30.24
OQU86344	Sorghum	nucleus	18.2	30.08
HORVU5Hr1G079900.1	Barley	cytosol	18.91	29.63
TraesCS5A01G306400.1	Wheat	nucleus	15.6	29.6
OQU80777	Sorghum	nucleus	19.39	29.29
OQU80775	Sorghum	cytosol, nucleus, peroxisome, plastid	18.68	28.32
AT4G16430.1	Thale cress	nucleus	26.95	24.41
AT5G46830.1	Thale cress	nucleus	28.61	23.68
GSMUA_Achr1P08130_001	Banana	mitochondrion	30.5	23.12
AT5G46760.1	Thale cress	nucleus	32.15	22.97
AT1G32640.1	Thale cress	nucleus	33.33	22.63
AT4G17880.1	Thale cress	nucleus	31.44	22.58
HORVU1Hr1G050560.1	Barley	nucleus	32.39	20.03
TraesCS1B01G208000.1	Wheat	nucleus	32.62	19.91
TraesCS1D01G196900.1	Wheat	nucleus	32.62	19.86
AT2G46510.1	Thale cress	nucleus	26.24	19.61
TraesCS1A01G193200.1	Wheat	nucleus	31.68	19.34
AT1G01260.1	Thale cress	nucleus	26.95	19.32
Os10t0575000-01	Rice	nucleus	31.91	19.31
Zm00001d030028_P001	Maize	nucleus	31.91	19.15
KXG39194	Sorghum	nucleus	31.91	19.09
Zm00001d047017_P001	Maize	nucleus	31.44	18.92
AT2G22750.3	Thale cress	nucleus	14.18	18.02
AT4G37850.1	Thale cress	nucleus	13.24	17.07
AT4G09820.1	Thale cress	nucleus	20.33	16.6
AT2G22760.1	Thale cress	nucleus	11.11	15.93
AT2G22770.1	Thale cress	nucleus	11.82	15.62
AT1G63650.1	Thale cress	nucleus	19.15	13.59
AT5G41315.2	Thale cress	nucleus	19.15	12.56
AT4G00480.2	Thale cress	nucleus	15.37	11.21

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:827990	ProteinID:AAB62853.1	ProteinID:AEE81947.1	EMBL:AJ519812
ArrayExpress:AT4G00870	EnsemblPlantsGene:AT4G00870	RefSeq:AT4G00870	TAIR:AT4G00870	RefSeq:AT4G00870-TAIR-G	EnsemblPlants:AT4G00870.1
TAIR:AT4G00870.1	ProteinID:CAB80896.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010629	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	InterPro:MYC/MYB_N	RefSeq:NP_567195.1	UniProt:O23090	PFAM:PF00010
PFAM:PF14215	PO:PO:0000037	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009009	PO:PO:0009010	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0025022	PFscan:PS50888
PANTHER:PTHR11514	PANTHER:PTHR11514:SF40	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00000AC1ED	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]

Coordinates

chr4:-:361933..363709

Molecular Weight (calculated)

47735.3 Da

IEP (calculated)

7.729

GRAVY (calculated)

-0.575

Length

423 amino acids

Sequence
(BLAST)

001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.