Factsheet for GSMUA_Achr10P07470_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P20820_001	Banana	nucleus	68.42	74.18
GSMUA_Achr1P18910_001	Banana	nucleus	57.39	58.12
GSMUA_Achr1P08130_001	Banana	mitochondrion	63.41	45.34
VIT_15s0048g02820.t01	Wine grape	nucleus	48.62	39.03
GSMUA_Achr3P00370_001	Banana	plastid	38.85	35.23
GSMUA_Achr7P04720_001	Banana	nucleus	39.1	33.26
AT4G00870.1	Thale cress	nucleus, plastid	34.34	32.39
GSMUA_Achr11P...	Banana	nucleus	36.09	32.14
GSMUA_Achr2P18140_001	Banana	nucleus	35.59	30.6
GSMUA_Achr4P16980_001	Banana	nucleus	35.59	28.01
GSMUA_Achr11P...	Banana	nucleus	33.33	27.65
GSMUA_Achr8P05350_001	Banana	nucleus	30.33	26.83
GSMUA_Achr5P18100_001	Banana	nucleus	32.83	26.79
GSMUA_Achr8P14720_001	Banana	nucleus	38.6	26.32
GSMUA_Achr10P...	Banana	nucleus	29.57	25.71
GSMUA_Achr8P26280_001	Banana	cytosol	29.32	25.27
GSMUA_Achr8P05170_001	Banana	nucleus	12.53	24.88
GSMUA_AchrUn_...	Banana	cytosol	32.08	24.76
GSMUA_Achr1P28110_001	Banana	nucleus	30.58	24.55
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	28.57	24.0
GSMUA_Achr6P35730_001	Banana	nucleus	28.57	23.22
GSMUA_Achr7P14640_001	Banana	nucleus	26.07	21.49
GSMUA_Achr2P08590_001	Banana	nucleus	14.29	21.43
GSMUA_Achr1P14370_001	Banana	cytosol, nucleus, plastid	30.33	21.04
GSMUA_Achr7P00800_001	Banana	cytosol	12.03	20.51
GSMUA_Achr3P26180_001	Banana	nucleus	14.54	19.66
GSMUA_Achr11P...	Banana	nucleus	20.8	17.62
GSMUA_Achr3P17620_001	Banana	nucleus	24.81	17.55
GSMUA_Achr4P03160_001	Banana	nucleus	14.29	17.43
GSMUA_Achr7P27600_001	Banana	nucleus	14.54	17.37
GSMUA_Achr3P30620_001	Banana	nucleus	14.04	17.28
GSMUA_AchrUn_...	Banana	nucleus	13.78	17.08
GSMUA_Achr8P11430_001	Banana	nucleus	23.06	16.85
GSMUA_Achr8P26460_001	Banana	nucleus	13.53	16.27
GSMUA_Achr4P23070_001	Banana	nucleus	12.53	15.97
GSMUA_Achr11P...	Banana	nucleus	22.06	15.94
GSMUA_Achr4P14580_001	Banana	nucleus	12.28	14.76
GSMUA_Achr11P...	Banana	nucleus	21.8	14.67
GSMUA_Achr6P21490_001	Banana	nucleus	22.81	13.98
GSMUA_Achr5P20600_001	Banana	nucleus	20.05	13.61
GSMUA_Achr4P03170_001	Banana	nucleus	10.78	12.61

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	EnsemblPlantsGene:GSMUA_Achr10G07470_001	EnsemblPlants:GSMUA_Achr10P07470_001	EnsemblPlants:GSMUA_Achr10T07470_001	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:M0RG73	InterPro:MYC/MYB_N	PFAM:PF00010	PFAM:PF14215	PFscan:PS50888
PANTHER:PTHR11514	PANTHER:PTHR11514:SF40	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002948733	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

Putative Transcription factor bHLH14 [Source:GMGC_GENE;Acc:GSMUA_Achr10G07470_001]

Coordinates

chr10:-:17693196..17694395

Molecular Weight (calculated)

43280.0 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.291

Length

399 amino acids

Sequence
(BLAST)

001: MDELIISPSC SSSLNAPAAA DLQYRLQSFL LARPEWWAYA IFWRASPDHR VLSFGDGNFR GARKSRGSDD SVDDGEWFYV VSLSRSFVVA RDGDANPVPA
101: RVYGSLAPVW LAGVRALQAC GCDRTREAQL HGIETLACFP VPGGVLELGS ADYIAENWVL VQQVSAIFNT TPHDAAIAGA EPTAAPAPLS AARKDGAGLS
201: SSVDSEHSDS DCHLLAERRR PKKRGRKQES GSHEGPANHV EAERQRREKL NHRFYALRSV VPNVSRMDKA SLLSDAVAYI KELEAKVDKL EAEAKTAMKE
301: TTTSATTHGT TTTTTSETAM EVEVKLLGAE ALIRAQSDDR NHPPARLMVA LRDLGLHVHH ASVSCVKESV LQDVVVEVPC ELQGHEGLRA ALLAKLQTS

Best Arabidopsis Sequence Match ( AT4G00870.1 )
(BLAST)

001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL

Arabidopsis Description

BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.