Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P05350_001 | Banana | nucleus | 64.58 | 66.3 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 65.23 | 63.58 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 66.31 | 53.39 |
| GSMUA_Achr10P... | Banana | nucleus | 49.03 | 49.46 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 51.4 | 47.89 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 50.54 | 47.66 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 46.87 | 44.83 |
| KRH68922 | Soybean | nucleus | 48.38 | 40.73 |
| CDY27319 | Canola | nucleus | 38.88 | 40.63 |
| CDY66312 | Canola | nucleus | 39.09 | 39.52 |
| Bra039279.1-P | Field mustard | nucleus | 39.09 | 39.43 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 51.4 | 39.4 |
| CDY56874 | Canola | nucleus | 41.68 | 39.31 |
| Bra004532.1-P | Field mustard | nucleus | 41.25 | 39.3 |
| CDX80023 | Canola | nucleus | 41.04 | 39.01 |
| PGSC0003DMT400000652 | Potato | nucleus | 49.89 | 38.63 |
| Solyc01g096050.2.1 | Tomato | nucleus | 50.11 | 38.35 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 47.52 | 38.06 |
| Solyc05g050560.1.1 | Tomato | nucleus | 47.52 | 38.0 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 48.16 | 37.29 |
| TraesCS4D01G275500.1 | Wheat | nucleus | 48.16 | 37.29 |
| TraesCS4A01G028900.1 | Wheat | nucleus | 47.95 | 37.19 |
| Zm00001d009013_P001 | Maize | nucleus | 49.03 | 37.15 |
| KRH06456 | Soybean | nucleus | 49.46 | 37.05 |
| KRH47899 | Soybean | nucleus | 49.46 | 36.58 |
| KRG97199 | Soybean | nucleus | 48.81 | 36.51 |
| Zm00001d039271_P001 | Maize | nucleus | 48.38 | 36.36 |
| EER99993 | Sorghum | nucleus | 48.81 | 36.33 |
| Os01t0235700-01 | Rice | nucleus | 47.95 | 35.98 |
| CDX90021 | Canola | nucleus | 41.9 | 35.93 |
| AT1G01260.1 | Thale cress | nucleus | 45.36 | 35.59 |
| TraesCS3A01G158600.1 | Wheat | nucleus | 46.87 | 35.23 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 47.08 | 34.88 |
| TraesCS3D01G166300.2 | Wheat | nucleus | 47.08 | 34.88 |
| AT2G46510.1 | Thale cress | nucleus | 42.55 | 34.81 |
| Bra033273.1-P | Field mustard | nucleus | 43.2 | 34.25 |
| EES19274 | Sorghum | nucleus | 43.2 | 34.07 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 25.7 | 30.2 |
| GSMUA_Achr10P... | Banana | nucleus | 25.27 | 29.32 |
| GSMUA_Achr11P... | Banana | nucleus | 28.08 | 29.02 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 29.37 | 29.0 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 27.43 | 28.86 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 47.3 | 28.55 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 27.65 | 27.59 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 20.73 | 26.09 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 27.65 | 25.25 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 10.58 | 24.38 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 30.45 | 24.1 |
| Zm00001d007536_P001 | Maize | plastid | 31.53 | 24.05 |
| GSMUA_Achr11P... | Banana | nucleus | 24.62 | 23.7 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 24.62 | 23.31 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 12.74 | 22.18 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 11.02 | 21.79 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 13.82 | 21.69 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.33 | 20.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.82 | 19.88 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 13.82 | 19.57 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 23.54 | 19.53 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 14.04 | 19.46 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 13.61 | 18.98 |
| GSMUA_Achr11P... | Banana | nucleus | 19.22 | 18.9 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 12.74 | 18.85 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 21.38 | 18.13 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 12.53 | 17.9 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 21.17 | 17.38 |
| GSMUA_Achr11P... | Banana | nucleus | 20.3 | 17.03 |
| GSMUA_Achr11P... | Banana | nucleus | 20.73 | 16.19 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 21.38 | 15.21 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 18.79 | 14.8 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 10.37 | 14.46 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 9.07 | 12.32 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr8G26280_001 | EnsemblPlants:GSMUA_Achr8P26280_001 | EnsemblPlants:GSMUA_Achr8T26280_001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:M0TTT1 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF47 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002960EC6 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
Putative Transcription factor bHLH3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G26280_001]
Coordinates
chr8:-:29904323..29906274
Molecular Weight (calculated)
50703.9 Da
IEP (calculated)
7.614
GRAVY (calculated)
-0.496
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAVLGRQG FDYLNAHQES SSDGHLTAVG GSDADLQNNL QDVVEGQTST WAYAIFWQIS RSESGDFVLG WGDGYCRDLG DWEEEGGGGA RSHPIDAAHQ
101: KMRKRMYFLA SMYFSFPKGE NPPGMALASG KHIWISEAGL TSPACGNYCV RAFLARSAGF RTIVFLPFDA GVLELGSVDP VPESFEAVQR IRAIFGRGLD
201: KKAAAAAAVD KIGENNDPKN PPAAGGTTLQ WNQNHIVNAH QKKFANGAAY VGHARGVVGE NPPRPANRFR PQELPPQRQQ LKSLPPPRKR GRKPANGREE
301: PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLGD AISYITELQQ RLKEMEAERE MCGDSSSLLD CKPKSHCPEI DVQAAQDEVI VRVSCPSETH
401: PISKVIQAFR ESQVNVVDST VAASNDSVLH TFVVKSPGTE QLTKEKLITA LTHDGARMPP ADR
101: KMRKRMYFLA SMYFSFPKGE NPPGMALASG KHIWISEAGL TSPACGNYCV RAFLARSAGF RTIVFLPFDA GVLELGSVDP VPESFEAVQR IRAIFGRGLD
201: KKAAAAAAVD KIGENNDPKN PPAAGGTTLQ WNQNHIVNAH QKKFANGAAY VGHARGVVGE NPPRPANRFR PQELPPQRQQ LKSLPPPRKR GRKPANGREE
301: PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLGD AISYITELQQ RLKEMEAERE MCGDSSSLLD CKPKSHCPEI DVQAAQDEVI VRVSCPSETH
401: PISKVIQAFR ESQVNVVDST VAASNDSVLH TFVVKSPGTE QLTKEKLITA LTHDGARMPP ADR
001: MGQKFWENQE DRAMVESTIG SEACDFFIST ASASNTALSK LVSPPSDSNL QQGLRHVVEG SDWDYALFWL ASNVNSSDGC VLIWGDGHCR VKKGASGEDY
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ
Arabidopsis Description
BHLH3Transcription factor bHLH3 [Source:UniProtKB/Swiss-Prot;Acc:O23487]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.