Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 50.25 | 59.06 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 51.24 | 55.38 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 70.15 | 47.8 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 63.18 | 47.74 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 55.22 | 47.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 75.12 | 46.89 |
| Solyc01g106460.2.1 | Tomato | nucleus | 54.23 | 44.86 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 73.13 | 44.28 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 69.15 | 41.62 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 64.18 | 39.81 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 61.69 | 37.92 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 55.72 | 35.78 |
| Os03t0725800-01 | Rice | nucleus | 62.19 | 34.82 |
| KXG37671 | Sorghum | nucleus | 61.19 | 34.55 |
| Bra013128.1-P | Field mustard | nucleus | 44.78 | 33.71 |
| Zm00001d033848_P004 | Maize | nucleus | 60.2 | 33.24 |
| CDX89627 | Canola | nucleus | 43.78 | 32.96 |
| CDX93135 | Canola | nucleus | 43.78 | 32.96 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 55.22 | 32.27 |
| Zm00001d013370_P001 | Maize | plastid | 59.2 | 31.9 |
| KRH49880 | Soybean | nucleus | 51.74 | 31.61 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 53.23 | 31.38 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 52.74 | 31.36 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 58.21 | 31.28 |
| CDY13737 | Canola | nucleus | 45.77 | 31.19 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 57.71 | 30.93 |
| PGSC0003DMT400013074 | Potato | nucleus | 53.73 | 30.59 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 50.75 | 30.54 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 57.21 | 30.5 |
| Bra039924.1-P | Field mustard | nucleus | 45.77 | 29.39 |
| AT4G37850.1 | Thale cress | nucleus | 47.26 | 28.96 |
| KRH10664 | Soybean | nucleus | 52.74 | 28.73 |
| KRH21680 | Soybean | nucleus, vacuole | 53.23 | 28.46 |
| CDY49678 | Canola | nucleus | 47.26 | 28.44 |
| CDX89511 | Canola | nucleus | 45.27 | 28.35 |
| Bra010617.1-P | Field mustard | nucleus | 46.77 | 28.14 |
| CDY72199 | Canola | nucleus | 46.77 | 28.14 |
| CDX76899 | Canola | nucleus | 44.78 | 27.86 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 48.26 | 27.71 |
| KRH42021 | Soybean | nucleus | 26.87 | 27.69 |
| CDY25628 | Canola | nucleus | 44.28 | 27.64 |
| Bra030210.1-P | Field mustard | nucleus | 44.28 | 27.64 |
| Bra011790.1-P | Field mustard | nucleus | 45.27 | 27.08 |
| CDX75679 | Canola | nucleus | 45.27 | 27.08 |
| CDX69336 | Canola | nucleus | 44.78 | 26.63 |
| AT2G22750.3 | Thale cress | nucleus | 43.78 | 26.43 |
| PGSC0003DMT400033757 | Potato | nucleus | 25.87 | 24.76 |
| Solyc02g091810.1.1 | Tomato | nucleus | 38.31 | 24.21 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 39.3 | 23.8 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 27.36 | 23.5 |
| PGSC0003DMT400078698 | Potato | nucleus | 23.38 | 22.49 |
| Solyc06g064590.1.1 | Tomato | nucleus | 31.34 | 22.42 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 25.37 | 22.37 |
| PGSC0003DMT400078699 | Potato | nucleus | 34.33 | 21.36 |
| Solyc06g064580.1.1 | Tomato | nucleus | 31.84 | 21.05 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 35.32 | 20.82 |
| Solyc02g091820.1.1 | Tomato | nucleus | 32.84 | 20.25 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 14.93 | 15.23 |
| GSMUA_Achr10P... | Banana | nucleus | 24.88 | 12.53 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 22.89 | 11.68 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 25.87 | 11.21 |
| GSMUA_Achr11P... | Banana | nucleus | 23.88 | 10.71 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 23.88 | 10.64 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 24.38 | 10.58 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 24.88 | 10.53 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 24.88 | 9.86 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 22.89 | 9.81 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 17.91 | 9.78 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 21.39 | 9.77 |
| GSMUA_Achr10P... | Banana | nucleus | 21.89 | 9.59 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 22.39 | 9.05 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 21.39 | 8.88 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 21.39 | 8.76 |
| GSMUA_Achr11P... | Banana | nucleus | 20.4 | 8.7 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 24.38 | 8.52 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 24.38 | 8.38 |
| GSMUA_Achr11P... | Banana | nucleus | 21.89 | 7.97 |
| GSMUA_Achr11P... | Banana | nucleus | 18.91 | 7.9 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 21.39 | 7.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.4 | 7.54 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 20.4 | 7.35 |
| GSMUA_Achr11P... | Banana | nucleus | 21.39 | 7.25 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 17.41 | 7.16 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 19.4 | 7.14 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 20.4 | 6.97 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 19.4 | 5.99 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P05170_001 | EnsemblPlants:GSMUA_Achr8T05170_001 | EnsemblPlantsGene:GSMUA_Achr8G05170_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000294C2C3 | UniProt:M0TMS0 | MapMan:15.5.32 | MapMan:25.4.1.7 | : |
Description
Putative Transcription factor bHLH25 [Source:GMGC_GENE;Acc:GSMUA_Achr8G05170_001]
Coordinates
chr8:-:3375541..3376326
Molecular Weight (calculated)
22138.9 Da
IEP (calculated)
9.564
GRAVY (calculated)
-0.302
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALILGQGA KKVSTGAKPA AQNQEHIMAE RKRREKLSQR FIALSAVVPG LKKTDKASVL GDAVEYLKRL QEKVKSLEDR VSKRNVEAAV LVKRSQLCAD
101: DDDGSPGDES FIEGQGGQSL PEIEARVCEK AILIKIHCEN RKGVLVKALS EIETLHLRVM NTSVVPFSGS SLDITVMEEG FSMTAKDLVK KLNSAFRQFM
201: R
101: DDDGSPGDES FIEGQGGQSL PEIEARVCEK AILIKIHCEN RKGVLVKALS EIETLHLRVM NTSVVPFSGS SLDITVMEEG FSMTAKDLVK KLNSAFRQFM
201: R
001: MDEDFFLPDF SLVDIDFDFN IYEENNLSPD ESLSNSRRAD QSSKFDHQMH FECLREKPKA AVKPMMKINN KQQLISFDFS SNVISSPAAE EIIMDKLVGR
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
Arabidopsis Description
BHLH19Uncharacterized protein At2g22760 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.