Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P03170_001 | Banana | nucleus | 66.87 | 65.1 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 21.69 | 42.11 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 22.59 | 40.32 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 23.8 | 39.3 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 26.2 | 37.18 |
| Solyc01g106460.2.1 | Tomato | nucleus | 23.8 | 32.51 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 25.0 | 31.2 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 30.12 | 29.94 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 29.22 | 29.66 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 28.92 | 29.63 |
| Bra013128.1-P | Field mustard | nucleus | 23.49 | 29.21 |
| CDX89627 | Canola | nucleus | 23.19 | 28.84 |
| CDX93135 | Canola | nucleus | 23.19 | 28.84 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 25.6 | 28.81 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 26.2 | 27.8 |
| PGSC0003DMT400078698 | Potato | nucleus | 17.47 | 27.75 |
| KRH42021 | Soybean | nucleus | 16.27 | 27.69 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 27.41 | 27.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.51 | 27.33 |
| PGSC0003DMT400033757 | Potato | nucleus | 17.17 | 27.14 |
| KRH49880 | Soybean | nucleus | 26.51 | 26.75 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 27.11 | 26.63 |
| CDY13737 | Canola | nucleus | 23.19 | 26.1 |
| Bra039924.1-P | Field mustard | nucleus | 24.1 | 25.56 |
| CDX89511 | Canola | nucleus | 24.7 | 25.55 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 17.47 | 25.44 |
| Solyc02g091810.1.1 | Tomato | nucleus | 24.1 | 25.16 |
| CDX76899 | Canola | nucleus | 24.4 | 25.08 |
| AT2G22750.3 | Thale cress | nucleus | 25.0 | 24.92 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 25.6 | 24.71 |
| AT4G37850.1 | Thale cress | nucleus | 24.4 | 24.7 |
| Solyc06g064590.1.1 | Tomato | nucleus | 20.78 | 24.56 |
| Bra030210.1-P | Field mustard | nucleus | 23.8 | 24.53 |
| CDY25628 | Canola | nucleus | 23.8 | 24.53 |
| PGSC0003DMT400078699 | Potato | nucleus | 23.8 | 24.46 |
| PGSC0003DMT400013074 | Potato | nucleus | 25.6 | 24.08 |
| Solyc02g091820.1.1 | Tomato | nucleus | 23.49 | 23.93 |
| KRH10664 | Soybean | nucleus | 26.51 | 23.85 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 23.8 | 23.65 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 16.57 | 23.5 |
| KRH21680 | Soybean | nucleus, vacuole | 26.51 | 23.4 |
| Solyc06g064580.1.1 | Tomato | nucleus | 21.39 | 23.36 |
| CDY49678 | Canola | nucleus | 23.49 | 23.35 |
| CDY72199 | Canola | nucleus | 23.19 | 23.05 |
| Bra010617.1-P | Field mustard | nucleus | 23.19 | 23.05 |
| CDX75679 | Canola | nucleus | 23.19 | 22.92 |
| Bra011790.1-P | Field mustard | nucleus | 23.19 | 22.92 |
| CDX69336 | Canola | nucleus | 22.89 | 22.49 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 22.59 | 21.43 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 11.45 | 19.29 |
| GSMUA_Achr10P... | Banana | nucleus | 14.76 | 12.28 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 13.55 | 11.42 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 15.06 | 11.36 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 15.36 | 10.99 |
| GSMUA_Achr11P... | Banana | nucleus | 14.76 | 10.94 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 15.36 | 10.87 |
| GSMUA_Achr11P... | Banana | nucleus | 15.36 | 10.83 |
| GSMUA_Achr10P... | Banana | nucleus | 14.76 | 10.68 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 14.46 | 10.64 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 15.06 | 10.53 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 15.66 | 10.46 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 14.46 | 10.37 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 15.06 | 10.18 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 16.87 | 9.93 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 10.84 | 9.78 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 14.46 | 9.47 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 13.55 | 9.3 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 15.06 | 8.7 |
| GSMUA_Achr11P... | Banana | nucleus | 14.16 | 8.51 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 14.76 | 8.38 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 13.55 | 8.24 |
| GSMUA_AchrUn_... | Banana | cytosol | 12.65 | 8.12 |
| GSMUA_Achr11P... | Banana | nucleus | 11.75 | 8.11 |
| GSMUA_Achr11P... | Banana | nucleus | 14.46 | 8.09 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 13.86 | 7.82 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 12.65 | 7.53 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 14.46 | 7.37 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 10.84 | 7.36 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr4G14580_001 | EnsemblPlants:GSMUA_Achr4P14580_001 | EnsemblPlants:GSMUA_Achr4T14580_001 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M0SNX3 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF48 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002948D20 | InterPro:bHLH_dom | SEG:seg |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G14580_001]
Coordinates
chr4:+:10909730..10912242
Molecular Weight (calculated)
36803.2 Da
IEP (calculated)
6.048
GRAVY (calculated)
-0.485
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQSSGQWPP PEEENSDLSF IYQPEMNSLD MFTANQIMES LGEELHHHHL PSGSCFPFDS AGSSEFNNNA SGSLVGIPYG TRMTTAVTNE LVSVEAPQAS
101: PNFLSFGNQD SLHDPPQLYM NSGKGVVEPQ NEITSLFSHG STWSEDTLEF QRQEKKSMGS RPPSSAQDHV IAERKRRERL NLQFIALSTI IPGLKKTDKA
201: TLLGDAVNYI RQLEEKVKTL EEKASERTVE STILVKKTHI PTGDHTSDAE GSPFSEAFPK ITASLNGNSI LVRVQCEKRK GLFVKVLSEI ERHHLSVINT
301: NVMPFASSSL NITVTAQASR YHFLLHSCKL QS
101: PNFLSFGNQD SLHDPPQLYM NSGKGVVEPQ NEITSLFSHG STWSEDTLEF QRQEKKSMGS RPPSSAQDHV IAERKRRERL NLQFIALSTI IPGLKKTDKA
201: TLLGDAVNYI RQLEEKVKTL EEKASERTVE STILVKKTHI PTGDHTSDAE GSPFSEAFPK ITASLNGNSI LVRVQCEKRK GLFVKVLSEI ERHHLSVINT
301: NVMPFASSSL NITVTAQASR YHFLLHSCKL QS
001: MDEDFFLPDF SLVDIDFDFN IYEENNLSPD ESLSNSRRAD QSSKFDHQMH FECLREKPKA AVKPMMKINN KQQLISFDFS SNVISSPAAE EIIMDKLVGR
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
Arabidopsis Description
BHLH19Uncharacterized protein At2g22760 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.