Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P18140_001 | Banana | nucleus | 73.21 | 70.69 |
| GSMUA_Achr11P... | Banana | nucleus | 64.96 | 60.5 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 64.29 | 58.9 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 76.79 | 58.8 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 60.27 | 53.25 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 53.79 | 51.39 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 47.32 | 48.18 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.21 | 40.04 |
| GSMUA_Achr10P... | Banana | nucleus | 32.14 | 36.09 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 31.47 | 35.79 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 27.9 | 33.97 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 31.03 | 30.82 |
| GSMUA_Achr10P... | Banana | nucleus | 30.36 | 29.63 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 29.02 | 28.08 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 31.03 | 27.97 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 29.46 | 27.79 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 29.91 | 27.29 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 32.59 | 25.39 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 26.79 | 24.79 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 10.71 | 23.88 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 29.69 | 23.84 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 13.62 | 20.68 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 12.28 | 20.68 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 10.27 | 19.66 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 24.55 | 19.5 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 13.84 | 18.96 |
| GSMUA_Achr11P... | Banana | nucleus | 19.64 | 18.68 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 13.17 | 18.21 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 13.39 | 17.96 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 21.88 | 17.95 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 12.28 | 17.57 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 12.95 | 17.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.5 | 17.39 |
| GSMUA_Achr11P... | Banana | nucleus | 21.21 | 17.21 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 25.0 | 17.2 |
| GSMUA_Achr11P... | Banana | nucleus | 21.65 | 16.36 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 10.94 | 14.76 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 19.2 | 14.63 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 9.6 | 12.61 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr11G17840_001 | EnsemblPlants:GSMUA_Achr11P17840_001 | EnsemblPlants:GSMUA_Achr11T17840_001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:M0RT64 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000295976B | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
Putative Transcription factor MYC4 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17840_001]
Coordinates
chr11:-:19392309..19394339
Molecular Weight (calculated)
48234.2 Da
IEP (calculated)
7.473
GRAVY (calculated)
-0.301
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLWADDNAS LMEAFMGTTD LQGFPWATAT APPTPTPPAA AALGPATALA SAAPAYFSQE TLQQRLQALI EGARESWTYG IFWQTSVDGA TGAYFLGWGD
101: GYYKGCEEDK RKQRVANAVS AVEQEHRRRV LRELHSLISG GGSSAPDETV DEEALFAGAP VWVAGADRLA SAPCERARQA QLFGLQTMVC VPVGSGVLEL
201: GSTDVVSHSH EIMGKIRVLF LFSSPDLPSS STAAAGCTGA TSRVSNQEAG MLCFSSAPAR APSNGQMKSS GGGKRPRKRG RKPANGREEP LNHVEAERQR
301: REKLNQRFYA LRAVVPNVSK MDKASLLGDA VSYINELRSN LQTLEADKEE TTTNGRCHGV EMEVKILGSE AMIRLQCQKR NHPAASLMAA LKDLDLELHY
401: ASVSVVKDLM IQQVTVKMSP GRVMTQEQLC ASLYSRVAAE APISSSSR
101: GYYKGCEEDK RKQRVANAVS AVEQEHRRRV LRELHSLISG GGSSAPDETV DEEALFAGAP VWVAGADRLA SAPCERARQA QLFGLQTMVC VPVGSGVLEL
201: GSTDVVSHSH EIMGKIRVLF LFSSPDLPSS STAAAGCTGA TSRVSNQEAG MLCFSSAPAR APSNGQMKSS GGGKRPRKRG RKPANGREEP LNHVEAERQR
301: REKLNQRFYA LRAVVPNVSK MDKASLLGDA VSYINELRSN LQTLEADKEE TTTNGRCHGV EMEVKILGSE AMIRLQCQKR NHPAASLMAA LKDLDLELHY
401: ASVSVVKDLM IQQVTVKMSP GRVMTQEQLC ASLYSRVAAE APISSSSR
001: MSPTNVQVTD YHLNQSKTDT TNLWSTDDDA SVMEAFIGGG SDHSSLFPPL PPPPLPQVNE DNLQQRLQAL IEGANENWTY AVFWQSSHGF AGEDNNNNNT
101: VLLGWGDGYY KGEEEKSRKK KSNPASAAEQ EHRKRVIREL NSLISGGVGG GDEAGDEEVT DTEWFFLVSM TQSFVKGTGL PGQAFSNSDT IWLSGSNALA
201: GSSCERARQG QIYGLQTMVC VATENGVVEL GSSEIIHQSS DLVDKVDTFF NFNNGGGEFG SWAFNLNPDQ GENDPGLWIS EPNGVDSGLV AAPVMNNGGN
301: DSTSNSDSQP ISKLCNGSSV ENPNPKVLKS CEMVNFKNGI ENGQEEDSSN KKRSPVSNNE EGMLSFTSVL PCDSNHSDLE ASVAKEAESN RVVVEPEKKP
401: RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYSLRAVVP NVSKMDKASL LGDAISYISE LKSKLQKAES DKEELQKQID VMNKEAGNAK SSVKDRKCLN
501: QESSVLIEME VDVKIIGWDA MIRIQCSKRN HPGAKFMEAL KELDLEVNHA SLSVVNDLMI QQATVKMGNQ FFTQDQLKVA LTEKVGECP
101: VLLGWGDGYY KGEEEKSRKK KSNPASAAEQ EHRKRVIREL NSLISGGVGG GDEAGDEEVT DTEWFFLVSM TQSFVKGTGL PGQAFSNSDT IWLSGSNALA
201: GSSCERARQG QIYGLQTMVC VATENGVVEL GSSEIIHQSS DLVDKVDTFF NFNNGGGEFG SWAFNLNPDQ GENDPGLWIS EPNGVDSGLV AAPVMNNGGN
301: DSTSNSDSQP ISKLCNGSSV ENPNPKVLKS CEMVNFKNGI ENGQEEDSSN KKRSPVSNNE EGMLSFTSVL PCDSNHSDLE ASVAKEAESN RVVVEPEKKP
401: RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYSLRAVVP NVSKMDKASL LGDAISYISE LKSKLQKAES DKEELQKQID VMNKEAGNAK SSVKDRKCLN
501: QESSVLIEME VDVKIIGWDA MIRIQCSKRN HPGAKFMEAL KELDLEVNHA SLSVVNDLMI QQATVKMGNQ FFTQDQLKVA LTEKVGECP
Arabidopsis Description
MYC4Transcription factor MYC4 [Source:UniProtKB/Swiss-Prot;Acc:O49687]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.