Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P04720_001 | Banana | nucleus | 48.74 | 53.73 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 43.13 | 50.68 |
| GSMUA_Achr11P... | Banana | nucleus | 40.04 | 46.21 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 36.75 | 40.95 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 37.91 | 38.66 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 40.62 | 35.9 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 33.85 | 35.79 |
| GSMUA_Achr11P... | Banana | nucleus | 32.88 | 35.34 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 44.68 | 33.77 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 44.68 | 33.33 |
| TraesCS1D01G196900.1 | Wheat | nucleus | 44.49 | 33.09 |
| Os10t0575000-01 | Rice | nucleus | 43.71 | 32.33 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 24.56 | 32.23 |
| GSMUA_Achr10P... | Banana | nucleus | 24.76 | 32.08 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 42.94 | 32.03 |
| Zm00001d030028_P001 | Maize | nucleus | 43.33 | 31.77 |
| KXG39194 | Sorghum | nucleus | 42.75 | 31.26 |
| Zm00001d047017_P001 | Maize | nucleus | 42.36 | 31.15 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 21.66 | 30.43 |
| GSMUA_Achr10P... | Banana | nucleus | 23.21 | 26.14 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 22.44 | 25.72 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 23.4 | 24.35 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 22.63 | 23.83 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 21.66 | 23.58 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 20.89 | 23.33 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 21.28 | 22.73 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 24.37 | 21.91 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 23.21 | 21.51 |
| GSMUA_Achr11P... | Banana | nucleus | 18.18 | 19.96 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 7.54 | 19.4 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 20.5 | 18.79 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 9.48 | 18.42 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 19.34 | 18.32 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 8.12 | 17.95 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 10.06 | 17.63 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 11.03 | 17.59 |
| GSMUA_Achr11P... | Banana | nucleus | 18.38 | 17.21 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 10.83 | 17.13 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 10.25 | 16.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.44 | 16.77 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 20.89 | 16.59 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 10.64 | 16.57 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 10.44 | 16.17 |
| GSMUA_Achr11P... | Banana | nucleus | 18.38 | 16.02 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 17.8 | 15.65 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 8.12 | 12.65 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 6.96 | 10.56 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSMUA_AchrUn_randomG02900_001 | EnsemblPlants:GSMUA_AchrUn_randomP02900_001 | EnsemblPlants:GSMUA_AchrUn_randomT02900_001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| UniProt:M0U5V2 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF43 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002961863 | InterPro:bHLH_dom | SEG:seg |
Description
Putative Transcription factor bHLH28 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02900_001]
Coordinates
chrchrUn_random:-:14345750..14347702
Molecular Weight (calculated)
55869.8 Da
IEP (calculated)
7.743
GRAVY (calculated)
-0.271
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNYVNCVFD KERIRPECRA GSAVVVPAAG PSFFPNASPS TIKPAAESNR PPAKRLVARA RLRPSPPPLT HEALDRRQSL RHGGLHLLPR GRSGAPPPPL
101: AAVCQLSRLL HRDLLGSGAL QPGEPAAAPQ LADRGCQREL DVRHILAEFP HRGAAALTWG DGYYRGCEED KGKPLGGGAS SLAEQEHRKH VLRELNALVS
201: GGGGDDAADE DVTDTEWFFL VSMTQTFALG AGLPGQALLS SSPAWIAGAD RMATALCERV RQARALGLRT MACVPLGSGV VELGSTHEIF RNSEILRKAR
301: ALFGDGVIDP SMLWFSVPSA PMPSSPERNE EVFLSSSAAV AEGVKCEGLF GGGESDNSDI EASAKEPLDH VEAERQRREK LNQRFYSLRS VVPNVSKMDK
401: ASLLADAVTY INELRSKTQA LESNNRGLHG RCGGEVDVEV KIVGSEAIIR VQCDRRSHPP ASLMVALKEL DLELYYANIS VVKELMIQQA TTKMTTRVYS
501: QQQLTAKLLG RMIAVLD
101: AAVCQLSRLL HRDLLGSGAL QPGEPAAAPQ LADRGCQREL DVRHILAEFP HRGAAALTWG DGYYRGCEED KGKPLGGGAS SLAEQEHRKH VLRELNALVS
201: GGGGDDAADE DVTDTEWFFL VSMTQTFALG AGLPGQALLS SSPAWIAGAD RMATALCERV RQARALGLRT MACVPLGSGV VELGSTHEIF RNSEILRKAR
301: ALFGDGVIDP SMLWFSVPSA PMPSSPERNE EVFLSSSAAV AEGVKCEGLF GGGESDNSDI EASAKEPLDH VEAERQRREK LNQRFYSLRS VVPNVSKMDK
401: ASLLADAVTY INELRSKTQA LESNNRGLHG RCGGEVDVEV KIVGSEAIIR VQCDRRSHPP ASLMVALKEL DLELYYANIS VVKELMIQQA TTKMTTRVYS
501: QQQLTAKLLG RMIAVLD
001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
Arabidopsis Description
MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.