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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_07s0205g00170.t01 Wine grape cytosol 31.66 84.92
VIT_00s0824g00020.t01 Wine grape nucleus 39.65 78.36
VIT_07s0205g00160.t01 Wine grape nucleus 34.32 62.37
VIT_00s1314g00010.t01 Wine grape nucleus 59.76 60.48
VIT_07s0205g00180.t01 Wine grape nucleus 60.06 58.0
GSMUA_Achr8P05170_001 Banana nucleus 31.36 52.74
GSMUA_Achr7P00800_001 Banana cytosol 31.07 44.87
VIT_03s0088g01240.t01 Wine grape nucleus 44.97 44.19
GSMUA_AchrUn_... Banana nucleus 41.72 43.79
GSMUA_Achr2P08590_001 Banana nucleus 34.32 43.61
VIT_00s0927g00010.t01 Wine grape nucleus 29.29 43.42
GSMUA_Achr3P26180_001 Banana nucleus 37.28 42.71
GSMUA_Achr7P27600_001 Banana nucleus 41.42 41.92
GSMUA_Achr3P30620_001 Banana nucleus 39.94 41.67
GSMUA_Achr8P26460_001 Banana nucleus 40.24 40.96
GSMUA_Achr4P23070_001 Banana nucleus 37.57 40.58
GSMUA_Achr4P03160_001 Banana nucleus 38.17 39.45
VIT_00s0384g00020.t01 Wine grape nucleus 21.01 36.04
KXG37671 Sorghum nucleus 36.39 34.55
Os03t0725800-01 Rice nucleus 36.69 34.54
Zm00001d033848_P004 Maize nucleus 36.69 34.07
Zm00001d013370_P001 Maize plastid 35.8 32.44
HORVU4Hr1G009440.2 Barley nucleus 31.36 31.09
TraesCS4B01G056600.2 Wheat nucleus 33.73 30.48
TraesCS4D01G056900.2 Wheat nucleus 33.14 29.87
TraesCS4A01G257900.2 Wheat nucleus 33.14 29.71
GSMUA_Achr4P14580_001 Banana nucleus 26.63 27.11
GSMUA_Achr4P03170_001 Banana nucleus 24.26 24.05
VIT_02s0025g02610.t01 Wine grape nucleus 16.27 15.24
VIT_15s0048g02820.t01 Wine grape nucleus 19.53 13.28
VIT_02s0012g01320.t01 Wine grape nucleus 22.49 11.46
VIT_07s0141g01060.t01 Wine grape nucleus 16.27 11.2
VIT_02s0025g03450.t01 Wine grape nucleus 19.23 10.35
VIT_15s0046g00320.t01 Wine grape nucleus 17.75 9.93
VIT_07s0104g00090.t01 Wine grape nucleus 18.34 8.91
VIT_15s0046g02560.t01 Wine grape nucleus 15.68 8.04
Protein Annotations
EntrezGene:100259543wikigene:100259543MapMan:15.5.32MapMan:25.4.1.7Gene3D:4.10.280.10ProteinID:CBI18607
ProteinID:CBI18607.3ncoils:CoilUniProt:D7SSH4EMBL:FN594978GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638EntrezGene:LOC100259543
wikigene:LOC100259543PFAM:PF00010PFscan:PS50888PANTHER:PTHR23042PANTHER:PTHR23042:SF100SMART:SM00353
SUPFAM:SSF47459UniParc:UPI0001BE1412ArrayExpress:VIT_07s0205g00190EnsemblPlantsGene:VIT_07s0205g00190EnsemblPlants:VIT_07s0205g00190.t01RefSeq:XP_002262815
RefSeq:XP_002262815.2RefSeq:XP_002262864RefSeq:XP_002262864.2InterPro:bHLH_domSEG:seg:
Description
No Description!
Coordinates
chr7:+:15299383..15301022
Molecular Weight (calculated)
37814.6 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.530
Length
338 amino acids
Sequence
(BLAST)
001: MEDPTFIHQY SPMQSLGDSL DEFDFKSFSS ENFSSYPSTS PKSSNPHLFD SIIENFQTGG VERPRKQLKT ASGKFCPTGS KTLEASSSSS SYLISFGNSD
101: LNPIPDDTLI WNGKPKDRAA ANGYMNLESL ISQDSYQKQD HSPTYGQGTK SLSSTRNPSQ NQEHVIAERK RREKLNLQFI ALSAIIPGLK KTDKASVLGD
201: AVKYVKQLQE RVKMLEEQTT KKMVESVVTV KKYQLSDDET SLSYHDSDSS SNQPLLEIEA RVSNKDVLIR IHCQKEKGFA VKILGEVEKL HLTVINSSFT
301: AFGDYIMDIT IVAQMDNGFC TTAKDLVKNL RLAFLQFM
Best Arabidopsis Sequence Match ( AT2G22770.1 )
(BLAST)
001: MDDSSFMDLM IDTDEYLIDD WESDFPICGE TNTNPGSESG SGTGFELLAE RPTKQMKTNN NMNSTSSSPS SSSSSGSRTS QVISFGSPDT KTNPVETSLN
101: FSNQVSMDQK VGSKRKDCVN NGGRREPHLL KEHVLAERKR RQKLNERLIA LSALLPGLKK TDKATVLEDA IKHLKQLQER VKKLEEERVV TKKMDQSIIL
201: VKRSQVYLDD DSSSYSSTCS AASPLSSSSD EVSIFKQTMP MIEARVSDRD LLIRVHCEKN KGCMIKILSS LEKFRLEVVN SFTLPFGNST LVITILTKMD
301: NKFSRPVEEV VKNIRVALAE
Arabidopsis Description
NAI1NAI1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWP9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.