Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66312 | Canola | nucleus | 93.45 | 90.39 |
| CDX80023 | Canola | nucleus | 74.49 | 67.76 |
| CDY56874 | Canola | nucleus | 73.81 | 66.6 |
| AT2G46510.1 | Thale cress | nucleus | 74.72 | 58.48 |
| CDY70012 | Canola | nucleus | 26.64 | 44.19 |
| GSMUA_Achr10P... | Banana | nucleus | 45.6 | 44.01 |
| KRH68922 | Soybean | nucleus | 52.82 | 42.55 |
| CDX77696 | Canola | nucleus | 11.29 | 41.67 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 56.21 | 41.23 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 41.76 | 41.02 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 53.05 | 40.66 |
| PGSC0003DMT400000652 | Potato | nucleus | 54.63 | 40.47 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 44.92 | 40.04 |
| Solyc01g096050.2.1 | Tomato | nucleus | 54.4 | 39.83 |
| CDX90021 | Canola | nucleus | 48.31 | 39.63 |
| Solyc05g050560.1.1 | Tomato | nucleus | 51.69 | 39.55 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 41.99 | 39.16 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 40.63 | 38.88 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 42.44 | 38.29 |
| KRG97199 | Soybean | nucleus | 53.05 | 37.96 |
| KRH47899 | Soybean | nucleus | 53.5 | 37.86 |
| CDY70013 | Canola | nucleus | 21.44 | 37.7 |
| KRH06456 | Soybean | nucleus | 52.37 | 37.54 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 40.18 | 36.78 |
| CDY32242 | Canola | nucleus | 36.79 | 36.14 |
| CDX90525 | Canola | nucleus | 36.57 | 35.53 |
| CDY34468 | Canola | nucleus | 36.12 | 35.48 |
| Zm00001d009013_P001 | Maize | nucleus | 46.95 | 34.04 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 44.02 | 33.91 |
| TraesCS4D01G275500.1 | Wheat | nucleus | 45.37 | 33.61 |
| Zm00001d039271_P001 | Maize | nucleus | 46.73 | 33.6 |
| TraesCS4A01G028900.1 | Wheat | nucleus | 45.15 | 33.5 |
| EER99993 | Sorghum | nucleus | 46.73 | 33.28 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 44.92 | 33.28 |
| TraesCS3A01G158600.1 | Wheat | nucleus | 45.37 | 32.63 |
| Os01t0235700-01 | Rice | nucleus | 45.37 | 32.58 |
| TraesCS3D01G166300.2 | Wheat | nucleus | 45.82 | 32.48 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 45.6 | 32.32 |
| CDY58502 | Canola | nucleus | 32.73 | 32.29 |
| CDX77688 | Canola | nucleus | 32.73 | 32.08 |
| EES19274 | Sorghum | nucleus | 42.21 | 31.86 |
| CDY09695 | Canola | nucleus | 34.31 | 31.21 |
| CDY26910 | Canola | nucleus | 28.67 | 28.67 |
| CDX73261 | Canola | nucleus | 28.67 | 28.67 |
| CDY03185 | Canola | nucleus | 29.8 | 27.91 |
| CDY03195 | Canola | nucleus | 34.09 | 27.71 |
| CDY35179 | Canola | nucleus | 34.09 | 26.87 |
| CDX84081 | Canola | nucleus | 32.05 | 26.84 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 45.82 | 26.47 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 11.29 | 26.32 |
| CDY35183 | Canola | nucleus | 29.8 | 26.04 |
| CDY44507 | Canola | nucleus | 34.31 | 25.94 |
| CDY33482 | Canola | nucleus | 15.8 | 25.83 |
| CDX77699 | Canola | nucleus | 15.8 | 25.83 |
| CDY59973 | Canola | nucleus | 29.57 | 25.74 |
| CDY03183 | Canola | nucleus | 29.57 | 25.74 |
| CDX78808 | Canola | nucleus | 33.63 | 25.73 |
| CDX77694 | Canola | nucleus | 13.54 | 23.72 |
| Zm00001d007536_P001 | Maize | plastid | 31.38 | 22.9 |
| CDX89627 | Canola | nucleus | 11.51 | 19.1 |
| CDX93135 | Canola | nucleus | 11.51 | 19.1 |
| CDY25513 | Canola | nucleus | 24.83 | 19.06 |
| CDY34367 | Canola | nucleus | 24.38 | 18.12 |
| CDY39747 | Canola | nucleus | 22.8 | 18.07 |
| CDX76899 | Canola | nucleus | 13.09 | 17.96 |
| CDY58950 | Canola | nucleus | 23.25 | 17.85 |
| CDY25628 | Canola | nucleus | 12.87 | 17.7 |
| CDX99505 | Canola | nucleus | 20.54 | 17.47 |
| CDX86891 | Canola | nucleus | 20.54 | 17.47 |
| CDY13737 | Canola | nucleus | 11.51 | 17.29 |
| CDY08314 | Canola | nucleus | 23.48 | 17.19 |
| CDY49678 | Canola | nucleus | 12.87 | 17.07 |
| CDY72199 | Canola | nucleus | 12.87 | 17.07 |
| CDX75679 | Canola | nucleus | 12.87 | 16.96 |
| CDX89511 | Canola | nucleus | 12.19 | 16.82 |
| CDX69336 | Canola | nucleus | 12.64 | 16.57 |
| CDY72121 | Canola | nucleus | 11.51 | 16.56 |
| CDY52591 | Canola | nucleus | 11.51 | 16.19 |
| CDX89512 | Canola | nucleus | 10.61 | 15.88 |
| CDY25630 | Canola | nucleus | 11.51 | 15.69 |
| CDY13735 | Canola | nucleus | 10.16 | 15.57 |
| CDX91907 | Canola | nucleus | 18.96 | 15.44 |
| CDX89513 | Canola | nucleus | 11.29 | 15.38 |
| CDY25629 | Canola | nucleus | 10.38 | 15.33 |
| CDY70506 | Canola | nucleus | 18.28 | 15.17 |
| CDY07214 | Canola | mitochondrion, nucleus | 18.28 | 14.94 |
| CDY51155 | Canola | mitochondrion, nucleus | 18.06 | 14.76 |
| CDY52593 | Canola | nucleus | 9.48 | 14.74 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | GO:A0A078GQ34 | UniProt:A0A078GQ34 | EnsemblPlants:CDY27319 |
| ProteinID:CDY27319 | ProteinID:CDY27319.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00037255001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N |
| PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF69 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0004EEF8E0 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
BnaC04g50860DBnaC04g50860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQ34]
Coordinates
chrLK032203:+:63577..65260
Molecular Weight (calculated)
49470.4 Da
IEP (calculated)
5.600
GRAVY (calculated)
-0.452
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLGWDEEE TSLANAVLGN SASDFLKTIS SSNQSLFLLM ETDDTLNKKL SSLVEWPNSE NFSWNYAILW QQTVSRSGHR VLGWGDGCCR EPKEEESSVC
101: NRRSSTLEEE EMRKRVLQKL QRVFGESDED NYALSLERVT ATETFFLASM YFFFNHGEGG PGRCFASGRH VWWVDSGDDY CFRSFMARSA GIRTVVMVNT
201: EAGVVELGSV WSLPENLELV KSVQGLFTRR AEPPLVVHKL FGQELNVVGS STNNQLRKSD SCNENRLAVG GGGGGGGGAC FVEEKRPKKR GRKPANGREE
301: PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLED AISYIKELQE RVKIIEGEGV RKDRTEVEIQ AVGEEVVVRV VSPLETHPAS RIIQAMRNAE
401: VSVMESKLSS AEETVFHSFV VKSSNGSDPL TREKLIAAIS TIS
101: NRRSSTLEEE EMRKRVLQKL QRVFGESDED NYALSLERVT ATETFFLASM YFFFNHGEGG PGRCFASGRH VWWVDSGDDY CFRSFMARSA GIRTVVMVNT
201: EAGVVELGSV WSLPENLELV KSVQGLFTRR AEPPLVVHKL FGQELNVVGS STNNQLRKSD SCNENRLAVG GGGGGGGGAC FVEEKRPKKR GRKPANGREE
301: PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLED AISYIKELQE RVKIIEGEGV RKDRTEVEIQ AVGEEVVVRV VSPLETHPAS RIIQAMRNAE
401: VSVMESKLSS AEETVFHSFV VKSSNGSDPL TREKLIAAIS TIS
001: MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI
Arabidopsis Description
AIBTranscription factor ABA-INDUCIBLE bHLH-TYPE [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.