Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51155 | Canola | mitochondrion, nucleus | 95.57 | 95.57 |
| CDX91907 | Canola | nucleus | 79.34 | 79.04 |
| CDY70506 | Canola | nucleus | 77.12 | 78.28 |
| AT4G00480.2 | Thale cress | nucleus | 75.83 | 70.86 |
| Bra037343.1-P | Field mustard | cytosol | 91.51 | 69.76 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 17.9 | 51.05 |
| GSMUA_Achr11P... | Banana | nucleus | 33.39 | 38.43 |
| CDY39747 | Canola | nucleus | 35.98 | 34.88 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 34.5 | 34.25 |
| CDY58950 | Canola | nucleus | 35.42 | 33.28 |
| GSMUA_Achr11P... | Banana | nucleus | 33.76 | 33.15 |
| CDY25513 | Canola | nucleus | 34.32 | 32.24 |
| GSMUA_Achr11P... | Banana | nucleus | 34.87 | 31.87 |
| CDY34367 | Canola | nucleus | 34.69 | 31.54 |
| CDY08314 | Canola | nucleus | 34.87 | 31.24 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 31.18 | 28.74 |
| CDX86891 | Canola | nucleus | 26.01 | 27.06 |
| CDX99505 | Canola | nucleus | 26.01 | 27.06 |
| CDY72121 | Canola | nucleus | 15.31 | 26.95 |
| CDX77694 | Canola | nucleus | 10.52 | 22.53 |
| CDY70012 | Canola | nucleus | 9.96 | 20.22 |
| CDX77688 | Canola | nucleus | 16.05 | 19.25 |
| CDX77696 | Canola | nucleus | 4.24 | 19.17 |
| CDY58502 | Canola | nucleus | 15.87 | 19.15 |
| CDY66312 | Canola | nucleus | 15.5 | 18.34 |
| CDY27319 | Canola | nucleus | 14.94 | 18.28 |
| CDY03185 | Canola | nucleus | 15.68 | 17.97 |
| CDY32242 | Canola | nucleus | 14.94 | 17.96 |
| CDY34468 | Canola | nucleus | 14.94 | 17.96 |
| CDX80023 | Canola | nucleus | 16.05 | 17.86 |
| CDX90525 | Canola | nucleus | 14.94 | 17.76 |
| CDY56874 | Canola | nucleus | 16.05 | 17.72 |
| CDY59973 | Canola | nucleus | 16.24 | 17.29 |
| CDY03183 | Canola | nucleus | 16.24 | 17.29 |
| CDY26910 | Canola | nucleus | 14.02 | 17.16 |
| CDX73261 | Canola | nucleus | 14.02 | 17.16 |
| CDY35183 | Canola | nucleus | 15.87 | 16.96 |
| CDY03195 | Canola | nucleus | 16.97 | 16.88 |
| CDX77699 | Canola | nucleus | 8.3 | 16.61 |
| CDX78808 | Canola | nucleus | 17.34 | 16.23 |
| CDY35179 | Canola | nucleus | 16.79 | 16.19 |
| CDY44507 | Canola | nucleus | 17.34 | 16.04 |
| CDX90021 | Canola | nucleus | 15.68 | 15.74 |
| CDX69336 | Canola | nucleus | 9.78 | 15.68 |
| CDY33482 | Canola | nucleus | 7.75 | 15.5 |
| CDY72199 | Canola | nucleus | 9.41 | 15.27 |
| CDY49678 | Canola | nucleus | 9.41 | 15.27 |
| CDX75679 | Canola | nucleus | 9.41 | 15.18 |
| CDX84081 | Canola | nucleus | 14.76 | 15.12 |
| CDY09695 | Canola | nucleus | 13.47 | 14.99 |
| CDX93135 | Canola | nucleus | 7.2 | 14.61 |
| CDX89627 | Canola | nucleus | 7.2 | 14.61 |
| CDX76899 | Canola | nucleus | 7.93 | 13.31 |
| CDY13737 | Canola | nucleus | 7.2 | 13.22 |
| CDX89511 | Canola | nucleus | 7.38 | 12.46 |
| CDY25628 | Canola | nucleus | 7.38 | 12.42 |
| CDX89512 | Canola | nucleus | 6.64 | 12.16 |
| CDY13735 | Canola | nucleus | 6.46 | 12.11 |
| CDY52593 | Canola | nucleus | 6.27 | 11.93 |
| CDY70013 | Canola | nucleus | 5.35 | 11.51 |
| CDY52591 | Canola | nucleus | 6.64 | 11.43 |
| CDX89513 | Canola | nucleus | 6.64 | 11.08 |
| CDY25629 | Canola | nucleus | 6.09 | 11.0 |
| CDY25630 | Canola | nucleus | 6.46 | 10.77 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078F2P2 | EnsemblPlants:CDY07214 | ProteinID:CDY07214 | ProteinID:CDY07214.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00123575001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF38 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EBFBFE | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng02290D
Coordinates
chrLK031975:+:859175..862252
Molecular Weight (calculated)
61503.5 Da
IEP (calculated)
5.672
GRAVY (calculated)
-0.523
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGVEAASG RNKRKNNLLR KQLAVALRSV QWSYAIFWSS SLTQPGVLEW EEGCYNGDIK KRKKSYEAAH YKYALQRSNQ LRKLYLCMLE GDSNTTISTT
101: HDVDDYGDDE EHNCNSATSM MLSPDDLSDE EWYYIVSMSY VFSPSQCLPG RALVTGETIW LCNAQYADNK LFSRSLLARS ASIQTVVCFP YLGGVIELGV
201: TELISEDHSL LQHIKSCLLE TSKPDCASYN FSARQASDDE KNQTKIKTSD GNSNSVLQEN HQIQSDEDVH YKRTVSTLVK YSADKDIHHL QPDLVSSNVG
301: SSFLRWKQRE QPNSILFQEH SNLQTLSQNV LRKILQEVPL MHSLDTKRTL PSKTLGLNQD DPWDTRKENE KFSVLKAMVP TVNQVDKEEI LNNTIKYLQE
401: LEERVEELES CMGSVNFVER QRKSVNDSVL IEETSGNYDD STKIDGNSGE TEQVTIARDE THLRVKLKET EVVMEVRCSY RDYIVADIME ALSKLHMDAF
501: SVRSYTLNGF LTLNLKAKFR GAAVASVGMI KRELRRAIGE II
101: HDVDDYGDDE EHNCNSATSM MLSPDDLSDE EWYYIVSMSY VFSPSQCLPG RALVTGETIW LCNAQYADNK LFSRSLLARS ASIQTVVCFP YLGGVIELGV
201: TELISEDHSL LQHIKSCLLE TSKPDCASYN FSARQASDDE KNQTKIKTSD GNSNSVLQEN HQIQSDEDVH YKRTVSTLVK YSADKDIHHL QPDLVSSNVG
301: SSFLRWKQRE QPNSILFQEH SNLQTLSQNV LRKILQEVPL MHSLDTKRTL PSKTLGLNQD DPWDTRKENE KFSVLKAMVP TVNQVDKEEI LNNTIKYLQE
401: LEERVEELES CMGSVNFVER QRKSVNDSVL IEETSGNYDD STKIDGNSGE TEQVTIARDE THLRVKLKET EVVMEVRCSY RDYIVADIME ALSKLHMDAF
501: SVRSYTLNGF LTLNLKAKFR GAAVASVGMI KRELRRAIGE II
001: MSLTMADGVE AAAGRSKRQN SLLRKQLALA VRSVQWSYAI FWSSSLTQPG VLEWGEGCYN GDMKKRKKSY ESHYKYGLQK SKELRKLYLS MLEGDSGTTV
101: STTHDNLNDD DDNCHSTSMM LSPDDLSDEE WYYLVSMSYV FSPSQCLPGR ASATGETIWL CNAQYAENKL FSRSLLARSA SIQTVVCFPY LGGVIELGVT
201: ELISEDHNLL RNIKSCLMEI SAHQDNDDEK KMEIKISEEK HQLPLGISDE DLHYKRTIST VLNYSADRSG KNDKNIRHRQ PNIVTSEPGS SFLRWKQCEQ
301: QVSGFVQKKK SQNVLRKILH DVPLMHTKRM FPSQNSGLNQ DDPSDRRKEN EKFSVLRTMV PTVNEVDKES ILNNTIKYLQ ELEARVEELE SCMGSVNFVE
401: RQRKTTENLN DSVLIEETSG NYDDSTKIDD NSGETEQVTV FRDKTHLRVK LKETEVVIEV RCSYRDYIVA DIMETLSNLH MDAFSVRSHT LNKFLTLNLK
501: AKFRGAAVAS VGMIKRELRR VIGDLF
101: STTHDNLNDD DDNCHSTSMM LSPDDLSDEE WYYLVSMSYV FSPSQCLPGR ASATGETIWL CNAQYAENKL FSRSLLARSA SIQTVVCFPY LGGVIELGVT
201: ELISEDHNLL RNIKSCLMEI SAHQDNDDEK KMEIKISEEK HQLPLGISDE DLHYKRTIST VLNYSADRSG KNDKNIRHRQ PNIVTSEPGS SFLRWKQCEQ
301: QVSGFVQKKK SQNVLRKILH DVPLMHTKRM FPSQNSGLNQ DDPSDRRKEN EKFSVLRTMV PTVNEVDKES ILNNTIKYLQ ELEARVEELE SCMGSVNFVE
401: RQRKTTENLN DSVLIEETSG NYDDSTKIDD NSGETEQVTV FRDKTHLRVK LKETEVVIEV RCSYRDYIVA DIMETLSNLH MDAFSVRSHT LNKFLTLNLK
501: AKFRGAAVAS VGMIKRELRR VIGDLF
Arabidopsis Description
ATMYC1Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JHC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.