Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024992.1-P | Field mustard | nucleus | 96.31 | 96.31 |
| CDY33482 | Canola | nucleus | 95.94 | 95.94 |
| CDX77696 | Canola | nucleus | 25.09 | 56.67 |
| CDY03185 | Canola | nucleus | 53.87 | 30.87 |
| AT5G46830.1 | Thale cress | nucleus | 57.93 | 30.72 |
| CDY35183 | Canola | nucleus | 56.09 | 29.98 |
| CDY59973 | Canola | nucleus | 54.98 | 29.27 |
| CDY03183 | Canola | nucleus | 54.98 | 29.27 |
| CDY26910 | Canola | nucleus | 42.8 | 26.19 |
| CDX73261 | Canola | nucleus | 42.8 | 26.19 |
| CDY70013 | Canola | nucleus | 22.88 | 24.6 |
| CDY58502 | Canola | nucleus | 40.59 | 24.5 |
| CDX77688 | Canola | nucleus | 40.22 | 24.11 |
| CDX84081 | Canola | nucleus | 45.76 | 23.44 |
| Solyc08g005050.2.1 | Tomato | nucleus | 36.53 | 21.34 |
| CDY03195 | Canola | nucleus | 40.59 | 20.18 |
| CDY35179 | Canola | nucleus | 40.59 | 19.57 |
| CDY44507 | Canola | nucleus | 41.33 | 19.11 |
| CDX78808 | Canola | nucleus | 40.59 | 19.0 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 45.76 | 18.7 |
| KRH75613 | Soybean | nucleus | 43.91 | 18.68 |
| PGSC0003DMT400002963 | Potato | nucleus | 40.96 | 18.56 |
| KRH45440 | Soybean | nucleus | 43.17 | 17.89 |
| Solyc08g076930.1.1 | Tomato | nucleus | 44.28 | 17.42 |
| PGSC0003DMT400045204 | Potato | nucleus | 44.28 | 17.29 |
| KRH74418 | Soybean | nucleus | 40.22 | 16.98 |
| CDY13737 | Canola | nucleus | 17.34 | 15.93 |
| CDY27319 | Canola | nucleus | 25.83 | 15.8 |
| CDY52593 | Canola | nucleus | 16.61 | 15.79 |
| CDX89627 | Canola | nucleus | 15.5 | 15.73 |
| CDX93135 | Canola | nucleus | 15.5 | 15.73 |
| CDY34468 | Canola | nucleus | 25.83 | 15.52 |
| CDY32242 | Canola | nucleus | 25.46 | 15.3 |
| CDX76899 | Canola | nucleus | 18.08 | 15.17 |
| CDX89513 | Canola | nucleus | 18.08 | 15.08 |
| CDY66312 | Canola | nucleus | 25.46 | 15.07 |
| KRH39540 | Soybean | nucleus | 40.59 | 15.05 |
| CDX90525 | Canola | nucleus | 25.09 | 14.91 |
| CDY13735 | Canola | nucleus | 15.87 | 14.88 |
| CDY25630 | Canola | nucleus | 17.71 | 14.77 |
| CDY52591 | Canola | nucleus | 16.97 | 14.6 |
| CDY25628 | Canola | nucleus | 17.34 | 14.6 |
| CDX89512 | Canola | nucleus | 15.87 | 14.53 |
| CDY25629 | Canola | nucleus | 15.87 | 14.33 |
| CDX89511 | Canola | nucleus | 16.97 | 14.33 |
| CDX69336 | Canola | nucleus | 17.71 | 14.2 |
| CDX75679 | Canola | nucleus | 17.34 | 13.99 |
| CDX80023 | Canola | nucleus | 25.09 | 13.96 |
| CDY72199 | Canola | nucleus | 16.97 | 13.77 |
| CDY49678 | Canola | nucleus | 16.97 | 13.77 |
| CDY56874 | Canola | nucleus | 24.72 | 13.65 |
| CDX90021 | Canola | nucleus | 26.2 | 13.15 |
| CDX77694 | Canola | nucleus | 12.18 | 13.04 |
| CDY09695 | Canola | nucleus | 23.25 | 12.94 |
| CDY72121 | Canola | nucleus | 14.39 | 12.66 |
| CDX86891 | Canola | nucleus | 19.93 | 10.36 |
| CDX99505 | Canola | nucleus | 19.56 | 10.17 |
| CDY39747 | Canola | nucleus | 20.66 | 10.02 |
| CDY25513 | Canola | nucleus | 20.3 | 9.53 |
| CDY58950 | Canola | nucleus | 20.3 | 9.53 |
| CDY34367 | Canola | nucleus | 20.66 | 9.4 |
| CDY07214 | Canola | mitochondrion, nucleus | 16.61 | 8.3 |
| CDX91907 | Canola | nucleus | 16.61 | 8.27 |
| CDY08314 | Canola | nucleus | 18.45 | 8.26 |
| CDY70506 | Canola | nucleus | 16.24 | 8.24 |
| CDY51155 | Canola | mitochondrion, nucleus | 16.24 | 8.12 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 4.06 | 5.79 |
| CDY70012 | Canola | nucleus | 2.58 | 2.62 |
Protein Annotations
| EnsemblPlants:CDX77699 | EnsemblPlantsGene:GSBRNA2T00128678001 | Gene3D:4.10.280.10 | GO:A0A078CNV2 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:CDX77699 |
| ProteinID:CDX77699.1 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF38FB | MapMan:15.5.32 | : |
Description
BnaC07g19530D
Coordinates
chrLK031812:+:1026801..1028647
Molecular Weight (calculated)
30528.4 Da
IEP (calculated)
6.381
GRAVY (calculated)
-0.540
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLLNSDDAL LMINTLLNSS DLWPLDPANL SQLPLAPTAI NSSSDLWSYV PANFGQIQYE ESNISASAVK LEDSAHFNID AKTTPEKKRG RRPTHGREEP
101: MNHVEAERLR REKLNQRFYA LRALLPNVTK REKASILEDT VTYINELKVN AENAESEKNA FEIQLNELKE KIAGRRNGSS SVCGGGEKTP EIEVKIDVKV
201: MDRDALIRLE SSKNNHPGAR LMNAFMDLEV EVNHASISVM NNLMIQQVTV KMGSRVYKQE QLRDLLLSKV N
101: MNHVEAERLR REKLNQRFYA LRALLPNVTK REKASILEDT VTYINELKVN AENAESEKNA FEIQLNELKE KIAGRRNGSS SVCGGGEKTP EIEVKIDVKV
201: MDRDALIRLE SSKNNHPGAR LMNAFMDLEV EVNHASISVM NNLMIQQVTV KMGSRVYKQE QLRDLLLSKV N
001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
Arabidopsis Description
MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.