Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017523.1-P | Field mustard | nucleus | 94.93 | 88.56 |
| CDY35183 | Canola | nucleus | 94.93 | 88.56 |
| CDY59973 | Canola | nucleus | 81.18 | 75.44 |
| CDY03183 | Canola | nucleus | 79.7 | 74.07 |
| CDX77694 | Canola | nucleus | 29.18 | 54.55 |
| CDX77699 | Canola | nucleus | 30.87 | 53.87 |
| CDY33482 | Canola | nucleus | 30.87 | 53.87 |
| CDX77696 | Canola | nucleus | 13.53 | 53.33 |
| CDX73261 | Canola | nucleus | 45.45 | 48.53 |
| CDY26910 | Canola | nucleus | 45.24 | 48.31 |
| CDY58502 | Canola | nucleus | 44.4 | 46.77 |
| CDX77688 | Canola | nucleus | 44.61 | 46.68 |
| CDX84081 | Canola | nucleus | 46.93 | 41.97 |
| Solyc08g005050.2.1 | Tomato | nucleus | 37.84 | 38.58 |
| CDY03195 | Canola | nucleus | 43.97 | 38.17 |
| KRH75613 | Soybean | nucleus | 49.68 | 36.89 |
| CDY35179 | Canola | nucleus | 43.76 | 36.83 |
| KRH74418 | Soybean | nucleus | 49.05 | 36.14 |
| PGSC0003DMT400002963 | Potato | nucleus | 45.45 | 35.95 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 50.32 | 35.9 |
| KRH45440 | Soybean | nucleus | 49.05 | 35.47 |
| CDX78808 | Canola | nucleus | 43.34 | 35.41 |
| CDY44507 | Canola | nucleus | 43.76 | 35.32 |
| Solyc08g076930.1.1 | Tomato | nucleus | 49.26 | 33.82 |
| PGSC0003DMT400045204 | Potato | nucleus | 49.26 | 33.57 |
| KRH39540 | Soybean | nucleus | 49.26 | 31.87 |
| CDY27319 | Canola | nucleus | 27.91 | 29.8 |
| CDY70013 | Canola | nucleus | 15.64 | 29.37 |
| CDY66312 | Canola | nucleus | 27.7 | 28.6 |
| CDX80023 | Canola | nucleus | 27.91 | 27.1 |
| CDY56874 | Canola | nucleus | 27.48 | 26.48 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 10.57 | 26.32 |
| CDY34468 | Canola | nucleus | 24.31 | 25.5 |
| CDY32242 | Canola | nucleus | 24.1 | 25.28 |
| CDX90021 | Canola | nucleus | 28.54 | 25.0 |
| CDX90525 | Canola | nucleus | 23.89 | 24.78 |
| CDY70012 | Canola | nucleus | 12.26 | 21.72 |
| CDY09695 | Canola | nucleus | 22.2 | 21.56 |
| CDX86891 | Canola | nucleus | 23.04 | 20.92 |
| CDX99505 | Canola | nucleus | 23.04 | 20.92 |
| CDX93135 | Canola | nucleus | 11.21 | 19.85 |
| CDX89627 | Canola | nucleus | 11.21 | 19.85 |
| CDY25513 | Canola | nucleus | 21.99 | 18.02 |
| CDY13737 | Canola | nucleus | 11.21 | 17.97 |
| CDX75679 | Canola | nucleus | 12.69 | 17.86 |
| CDY49678 | Canola | nucleus | 12.26 | 17.37 |
| CDX76899 | Canola | nucleus | 11.84 | 17.34 |
| CDY70506 | Canola | nucleus | 19.45 | 17.23 |
| CDX69336 | Canola | nucleus | 12.26 | 17.16 |
| CDY34367 | Canola | nucleus | 21.56 | 17.11 |
| CDY25628 | Canola | nucleus | 11.63 | 17.08 |
| CDY72199 | Canola | nucleus | 12.05 | 17.07 |
| CDY39747 | Canola | nucleus | 20.08 | 16.99 |
| CDX91907 | Canola | nucleus | 19.45 | 16.91 |
| CDX89511 | Canola | nucleus | 11.42 | 16.82 |
| CDY58950 | Canola | nucleus | 19.87 | 16.29 |
| CDY08314 | Canola | nucleus | 20.72 | 16.2 |
| CDY07214 | Canola | mitochondrion, nucleus | 17.97 | 15.68 |
| CDY72121 | Canola | nucleus | 10.15 | 15.58 |
| CDY51155 | Canola | mitochondrion, nucleus | 17.76 | 15.5 |
| CDX89512 | Canola | nucleus | 9.51 | 15.2 |
| CDY52593 | Canola | nucleus | 9.09 | 15.09 |
| CDY25629 | Canola | nucleus | 9.3 | 14.67 |
| CDY13735 | Canola | nucleus | 8.88 | 14.53 |
| CDY52591 | Canola | nucleus | 9.3 | 13.97 |
| CDX89513 | Canola | nucleus | 9.51 | 13.85 |
| CDY25630 | Canola | nucleus | 9.09 | 13.23 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078EMF3 | EnsemblPlants:CDY03185 | ProteinID:CDY03185 | ProteinID:CDY03185.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00115657001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 |
| PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE8224 |
| InterPro:bHLH_dom | : | : | : | : | : |
Description
BnaC09g19710D
Coordinates
chrLK031941:-:442928..444451
Molecular Weight (calculated)
52748.6 Da
IEP (calculated)
6.042
GRAVY (calculated)
-0.471
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLNTNVTA SMIDALMRSP SSGFWPPLSP ANPSPDSALQ KRLQAVLNGT HEAWTYAILW TPSYYDYSGE SVLKWGDGIY KGEEADNTRR KRRRMTVAER
101: EHWSIILPEL SSMTSDEDLP VIDGEDDVEV SDTEWFYMVS MTVSFGSETG LPGKAFATYK PVWVTGSDHI LASGCERAKK GGYSGLQTIV CIPLDNGVLE
201: LGSTVEIKQN PDLFNKIRVV FSFEGSRDFS VYPQTVNFAT STLERALHSP NQNYPEQIPI DDGELLHSAG DIDGSDHSDI EATVVPENKQ KKKRGRKLAN
301: GRKEPLNHVQ AERLRREKLN QRFYALRATV PNVSKMDKTS LLGDAISYIK ELKSRAENAE SERNAIQILL NKLKEEMAGR NAVCRGGKNA SEIETANIDV
401: KILGCDAMVR LESSKRNHPA ARLMNAFMDL DVELNHASIS VIHDLMIQQA TVKMGSRMYT QDQLQAMLVS KIN
101: EHWSIILPEL SSMTSDEDLP VIDGEDDVEV SDTEWFYMVS MTVSFGSETG LPGKAFATYK PVWVTGSDHI LASGCERAKK GGYSGLQTIV CIPLDNGVLE
201: LGSTVEIKQN PDLFNKIRVV FSFEGSRDFS VYPQTVNFAT STLERALHSP NQNYPEQIPI DDGELLHSAG DIDGSDHSDI EATVVPENKQ KKKRGRKLAN
301: GRKEPLNHVQ AERLRREKLN QRFYALRATV PNVSKMDKTS LLGDAISYIK ELKSRAENAE SERNAIQILL NKLKEEMAGR NAVCRGGKNA SEIETANIDV
401: KILGCDAMVR LESSKRNHPA ARLMNAFMDL DVELNHASIS VIHDLMIQQA TVKMGSRMYT QDQLQAMLVS KIN
001: MINTDDNLLM IEALLTSDPS PPLLPANLSL ETTLPKRLHA VLNGTHEPWS YAIFWKPSYD DFSGEAVLKW GDGVYTGGNE EKTRGRLRRK KTILSSPEEK
101: ERRSNVIREL NLMISGEAFP VVEDDVSDDD DVEVTDMEWF FLVSMTWSFG NGSGLAGKAF ASYNPVLVTG SDLIYGSGCD RAKQGGDVGL QTILCIPSHN
201: GVLELASTEE IRPNSDLFNR IRFLFGGSKY FSGAPNSNSE LFPFQLESSC SSTVTGNPNP SPVYLQNRYN LNFSTSSSTL ARAPCGDVLS FGENVKQSFE
301: NRNPNTYSDQ IQNVVPHATV MLEKKKGKKR GRKPAHGRDK PLNHVEAERM RREKLNHRFY ALRAVVPNVS KMDKTSLLED AVCYINELKS KAENVELEKH
401: AIEIQFNELK EIAGQRNAIP SVCKYEEKAS EMMKIEVKIM ESDDAMVRVE SRKDHHPGAR LMNALMDLEL EVNHASISVM NDLMIQQANV KMGLRIYKQE
501: ELRDLLMSKI S
101: ERRSNVIREL NLMISGEAFP VVEDDVSDDD DVEVTDMEWF FLVSMTWSFG NGSGLAGKAF ASYNPVLVTG SDLIYGSGCD RAKQGGDVGL QTILCIPSHN
201: GVLELASTEE IRPNSDLFNR IRFLFGGSKY FSGAPNSNSE LFPFQLESSC SSTVTGNPNP SPVYLQNRYN LNFSTSSSTL ARAPCGDVLS FGENVKQSFE
301: NRNPNTYSDQ IQNVVPHATV MLEKKKGKKR GRKPAHGRDK PLNHVEAERM RREKLNHRFY ALRAVVPNVS KMDKTSLLED AVCYINELKS KAENVELEKH
401: AIEIQFNELK EIAGQRNAIP SVCKYEEKAS EMMKIEVKIM ESDDAMVRVE SRKDHHPGAR LMNALMDLEL EVNHASISVM NDLMIQQANV KMGLRIYKQE
501: ELRDLLMSKI S
Arabidopsis Description
BHLH28Transcription factor bHLH28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.