Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017527.1-P | Field mustard | nucleus | 40.21 | 100.0 |
| CDY03195 | Canola | nucleus | 95.55 | 98.53 |
| CDY58502 | Canola | nucleus | 69.04 | 86.41 |
| CDX77688 | Canola | nucleus | 69.22 | 86.06 |
| AT5G46760.1 | Thale cress | nucleus | 77.94 | 73.99 |
| CDX78808 | Canola | nucleus | 65.12 | 63.21 |
| CDY44507 | Canola | nucleus | 65.3 | 62.63 |
| CDX73261 | Canola | nucleus | 41.99 | 53.27 |
| CDY26910 | Canola | nucleus | 41.99 | 53.27 |
| Solyc08g005050.2.1 | Tomato | nucleus | 42.35 | 51.29 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 59.43 | 50.38 |
| PGSC0003DMT400002963 | Potato | nucleus | 53.38 | 50.17 |
| KRH75613 | Soybean | nucleus | 56.41 | 49.76 |
| CDX84081 | Canola | nucleus | 46.44 | 49.34 |
| KRH45440 | Soybean | nucleus | 56.23 | 48.32 |
| KRH74418 | Soybean | nucleus | 54.8 | 47.98 |
| CDX77696 | Canola | nucleus | 9.96 | 46.67 |
| Solyc08g076930.1.1 | Tomato | nucleus | 56.94 | 46.44 |
| PGSC0003DMT400045204 | Potato | nucleus | 56.76 | 45.97 |
| CDY03185 | Canola | nucleus | 36.83 | 43.76 |
| KRH39540 | Soybean | nucleus | 56.58 | 43.5 |
| CDY59973 | Canola | nucleus | 38.08 | 42.04 |
| CDY03183 | Canola | nucleus | 37.9 | 41.85 |
| CDY35183 | Canola | nucleus | 37.72 | 41.81 |
| CDX77699 | Canola | nucleus | 19.57 | 40.59 |
| CDY33482 | Canola | nucleus | 19.57 | 40.59 |
| CDX77694 | Canola | nucleus | 17.44 | 38.74 |
| CDY27319 | Canola | nucleus | 26.87 | 34.09 |
| CDY70013 | Canola | nucleus | 15.12 | 33.73 |
| CDY66312 | Canola | nucleus | 26.51 | 32.53 |
| CDY56874 | Canola | nucleus | 26.87 | 30.75 |
| CDX80023 | Canola | nucleus | 26.51 | 30.6 |
| CDX90021 | Canola | nucleus | 27.76 | 28.89 |
| CDY32242 | Canola | nucleus | 22.95 | 28.6 |
| CDY34468 | Canola | nucleus | 22.95 | 28.6 |
| CDX90525 | Canola | nucleus | 22.78 | 28.07 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 9.25 | 27.37 |
| CDY70012 | Canola | nucleus | 12.1 | 25.47 |
| CDY09695 | Canola | nucleus | 21.0 | 24.23 |
| CDX86891 | Canola | nucleus | 20.28 | 21.88 |
| CDX99505 | Canola | nucleus | 20.28 | 21.88 |
| CDY13737 | Canola | nucleus | 11.39 | 21.69 |
| CDX76899 | Canola | nucleus | 12.46 | 21.67 |
| CDX89627 | Canola | nucleus | 10.14 | 21.35 |
| CDX93135 | Canola | nucleus | 10.14 | 21.35 |
| CDY25628 | Canola | nucleus | 11.74 | 20.5 |
| CDY49678 | Canola | nucleus | 12.1 | 20.36 |
| CDX89511 | Canola | nucleus | 11.57 | 20.25 |
| CDY72199 | Canola | nucleus | 11.92 | 20.06 |
| CDX75679 | Canola | nucleus | 11.92 | 19.94 |
| CDY39747 | Canola | nucleus | 19.22 | 19.32 |
| CDX69336 | Canola | nucleus | 11.57 | 19.23 |
| CDY58950 | Canola | nucleus | 19.57 | 19.06 |
| CDY25513 | Canola | nucleus | 19.22 | 18.72 |
| CDX89512 | Canola | nucleus | 9.43 | 17.91 |
| CDY34367 | Canola | nucleus | 18.86 | 17.79 |
| CDY08314 | Canola | nucleus | 19.04 | 17.69 |
| CDY70506 | Canola | nucleus | 16.19 | 17.04 |
| CDY25629 | Canola | nucleus | 9.07 | 17.0 |
| CDY13735 | Canola | nucleus | 8.72 | 16.95 |
| CDY72121 | Canola | nucleus | 9.25 | 16.88 |
| CDY52593 | Canola | nucleus | 8.54 | 16.84 |
| CDY07214 | Canola | mitochondrion, nucleus | 16.19 | 16.79 |
| CDX91907 | Canola | nucleus | 16.19 | 16.73 |
| CDY52591 | Canola | nucleus | 9.25 | 16.51 |
| CDY51155 | Canola | mitochondrion, nucleus | 15.84 | 16.42 |
| CDX89513 | Canola | nucleus | 9.43 | 16.31 |
| CDY25630 | Canola | nucleus | 9.07 | 15.69 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078HCH5 | UniProt:A0A078HCH5 | EnsemblPlants:CDY35179 | ProteinID:CDY35179 |
| ProteinID:CDY35179.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00058078001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 |
| PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0004EF1686 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaA09g18160DBnaA09g18160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCH5]
Coordinates
chrLK032347:+:357137..359069
Molecular Weight (calculated)
61847.0 Da
IEP (calculated)
4.799
GRAVY (calculated)
-0.651
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDHRSRVSL SPPDAHMSNY FLNQSTATDD DNASAAMEAF IGTNHWSQQP SLPPPPPSLS QFNEDTLQQR LQTLIESAGE RWTYAIFWQI SHDFDSPAGE
101: NTVILGWGDG YYRGEEDKEK KKKQSSSSNP AEQEHRKRVI RELNSLIAGG GAGVSDEAND EEVTDTEWFF LVSMTQSFVN GVGLPGESFL NSRVIWLSGS
201: GALTGSGCER ARQGEVYGLQ TIVCIAAENG VVELGSSEVI SQSSDLMDKV NGLFNGNGGG EASSWGFNLN PDQGENDPAL WLSEPNITGI EPVQETPAIE
301: NAADLNFSSS GLNQNGNFKQ GSSSNKKRSP VGKDEEMLSF STVVRSAAKS VDSDHSDIEA SVVKEAIIVE PEKKPRKRGR KPANGREEPL NHVEAERQRR
401: EKLNQRFYSL RAVVPNVSKM DKASLLGDAI SYINELKTKL QQAETDKEEV QKQLDRMSKE GGGSRRAKER KSNLDSASSV EMEIDVKIIG WDVMIRVQCG
501: KKNHPGARFM EALKELDLEV NHASLSMVND LMIQQATVKM GSQFFNHDQL KAALMLKVGE DS
101: NTVILGWGDG YYRGEEDKEK KKKQSSSSNP AEQEHRKRVI RELNSLIAGG GAGVSDEAND EEVTDTEWFF LVSMTQSFVN GVGLPGESFL NSRVIWLSGS
201: GALTGSGCER ARQGEVYGLQ TIVCIAAENG VVELGSSEVI SQSSDLMDKV NGLFNGNGGG EASSWGFNLN PDQGENDPAL WLSEPNITGI EPVQETPAIE
301: NAADLNFSSS GLNQNGNFKQ GSSSNKKRSP VGKDEEMLSF STVVRSAAKS VDSDHSDIEA SVVKEAIIVE PEKKPRKRGR KPANGREEPL NHVEAERQRR
401: EKLNQRFYSL RAVVPNVSKM DKASLLGDAI SYINELKTKL QQAETDKEEV QKQLDRMSKE GGGSRRAKER KSNLDSASSV EMEIDVKIIG WDVMIRVQCG
501: KKNHPGARFM EALKELDLEV NHASLSMVND LMIQQATVKM GSQFFNHDQL KAALMLKVGE DS
001: MNGTTSSINF LTSDDDASAA AMEAFIGTNH HSSLFPPPPQ QPPQPQFNED TLQQRLQALI ESAGENWTYA IFWQISHDFD SSTGDNTVIL GWGDGYYKGE
101: EDKEKKKNNT NTAEQEHRKR VIRELNSLIS GGIGVSDESN DEEVTDTEWF FLVSMTQSFV NGVGLPGESF LNSRVIWLSG SGALTGSGCE RAGQGQIYGL
201: KTMVCIATQN GVVELGSSEV ISQSSDLMHK VNNLFNFNNG GGNNGVEASS WGFNLNPDQG ENDPALWISE PTNTGIESPA RVNNGNNSNS NSKSDSHQIS
301: KLEKNDISSV ENQNRQSSCL VEKDLTFQGG LLKSNETLSF CGNESSKKRT SVSKGSNNDE GMLSFSTVVR SAANDSDHSD LEASVVKEAI VVEPPEKKPR
401: KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYSLRAVVPN VSKMDKASLL GDAISYINEL KSKLQQAESD KEEIQKKLDG MSKEGNNGKG CGSRAKERKS
501: SNQDSTASSI EMEIDVKIIG WDVMIRVQCG KKDHPGARFM EALKELDLEV NHASLSVVND LMIQQATVKM GSQFFNHDQL KVALMTKVGE NY
101: EDKEKKKNNT NTAEQEHRKR VIRELNSLIS GGIGVSDESN DEEVTDTEWF FLVSMTQSFV NGVGLPGESF LNSRVIWLSG SGALTGSGCE RAGQGQIYGL
201: KTMVCIATQN GVVELGSSEV ISQSSDLMHK VNNLFNFNNG GGNNGVEASS WGFNLNPDQG ENDPALWISE PTNTGIESPA RVNNGNNSNS NSKSDSHQIS
301: KLEKNDISSV ENQNRQSSCL VEKDLTFQGG LLKSNETLSF CGNESSKKRT SVSKGSNNDE GMLSFSTVVR SAANDSDHSD LEASVVKEAI VVEPPEKKPR
401: KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYSLRAVVPN VSKMDKASLL GDAISYINEL KSKLQQAESD KEEIQKKLDG MSKEGNNGKG CGSRAKERKS
501: SNQDSTASSI EMEIDVKIIG WDVMIRVQCG KKDHPGARFM EALKELDLEV NHASLSVVND LMIQQATVKM GSQFFNHDQL KVALMTKVGE NY
Arabidopsis Description
MYC3Transcription factor MYC3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIP9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.