Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58502 | Canola | nucleus | 96.68 | 97.33 |
| Bra024998.1-P | Field mustard | nucleus | 96.68 | 75.34 |
| CDY03195 | Canola | nucleus | 83.85 | 69.54 |
| CDY35179 | Canola | nucleus | 86.06 | 69.22 |
| AT5G46760.1 | Thale cress | nucleus | 84.51 | 64.53 |
| CDX78808 | Canola | nucleus | 70.13 | 54.75 |
| CDY44507 | Canola | nucleus | 69.25 | 53.41 |
| CDX73261 | Canola | nucleus | 50.22 | 51.24 |
| CDY26910 | Canola | nucleus | 50.0 | 51.02 |
| Solyc08g005050.2.1 | Tomato | nucleus | 49.34 | 48.06 |
| CDX77696 | Canola | nucleus | 12.61 | 47.5 |
| CDX84081 | Canola | nucleus | 55.31 | 47.26 |
| CDY03185 | Canola | nucleus | 46.68 | 44.61 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 65.27 | 44.49 |
| PGSC0003DMT400002963 | Potato | nucleus | 58.85 | 44.48 |
| KRH75613 | Soybean | nucleus | 61.73 | 43.8 |
| KRH45440 | Soybean | nucleus | 61.28 | 42.35 |
| KRH74418 | Soybean | nucleus | 59.96 | 42.21 |
| CDY35183 | Canola | nucleus | 46.9 | 41.81 |
| CDY59973 | Canola | nucleus | 46.46 | 41.26 |
| CDY03183 | Canola | nucleus | 46.46 | 41.26 |
| Solyc08g076930.1.1 | Tomato | nucleus | 62.39 | 40.93 |
| CDX77699 | Canola | nucleus | 24.11 | 40.22 |
| PGSC0003DMT400045204 | Potato | nucleus | 61.73 | 40.2 |
| CDY33482 | Canola | nucleus | 23.89 | 39.85 |
| KRH39540 | Soybean | nucleus | 61.5 | 38.03 |
| CDY70013 | Canola | nucleus | 19.25 | 34.52 |
| CDX77694 | Canola | nucleus | 19.25 | 34.39 |
| CDY27319 | Canola | nucleus | 32.08 | 32.73 |
| CDY66312 | Canola | nucleus | 31.86 | 31.44 |
| CDX80023 | Canola | nucleus | 31.64 | 29.36 |
| CDY56874 | Canola | nucleus | 31.64 | 29.12 |
| CDX90021 | Canola | nucleus | 32.96 | 27.59 |
| CDY32242 | Canola | nucleus | 26.99 | 27.05 |
| CDY34468 | Canola | nucleus | 26.99 | 27.05 |
| CDX90525 | Canola | nucleus | 26.33 | 26.1 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 10.4 | 24.74 |
| CDY09695 | Canola | nucleus | 24.11 | 22.38 |
| CDY70012 | Canola | nucleus | 12.83 | 21.72 |
| CDX89627 | Canola | nucleus | 12.61 | 21.35 |
| CDX93135 | Canola | nucleus | 12.61 | 21.35 |
| CDX76899 | Canola | nucleus | 15.04 | 21.05 |
| CDY13737 | Canola | nucleus | 13.72 | 21.02 |
| CDX86891 | Canola | nucleus | 24.11 | 20.92 |
| CDX99505 | Canola | nucleus | 24.11 | 20.92 |
| CDY49678 | Canola | nucleus | 14.82 | 20.06 |
| CDY25628 | Canola | nucleus | 14.16 | 19.88 |
| CDY72199 | Canola | nucleus | 14.6 | 19.76 |
| CDX89511 | Canola | nucleus | 13.94 | 19.63 |
| CDX75679 | Canola | nucleus | 14.38 | 19.35 |
| CDX69336 | Canola | nucleus | 14.16 | 18.93 |
| CDY39747 | Canola | nucleus | 22.79 | 18.43 |
| CDY25513 | Canola | nucleus | 23.23 | 18.2 |
| CDY58950 | Canola | nucleus | 23.01 | 18.02 |
| CDX89512 | Canola | nucleus | 11.73 | 17.91 |
| CDY72121 | Canola | nucleus | 11.73 | 17.21 |
| CDY34367 | Canola | nucleus | 22.57 | 17.11 |
| CDY08314 | Canola | nucleus | 22.57 | 16.86 |
| CDY25629 | Canola | nucleus | 11.06 | 16.67 |
| CDX89513 | Canola | nucleus | 11.95 | 16.62 |
| CDY13735 | Canola | nucleus | 10.62 | 16.61 |
| CDY52591 | Canola | nucleus | 11.5 | 16.51 |
| CDY52593 | Canola | nucleus | 10.4 | 16.49 |
| CDY70506 | Canola | nucleus | 19.25 | 16.29 |
| CDY07214 | Canola | mitochondrion, nucleus | 19.25 | 16.05 |
| CDY25630 | Canola | nucleus | 11.5 | 16.0 |
| CDX91907 | Canola | nucleus | 19.25 | 15.99 |
| CDY51155 | Canola | mitochondrion, nucleus | 18.81 | 15.68 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078CRC8 | EnsemblPlants:CDX77688 | ProteinID:CDX77688 | ProteinID:CDX77688.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00128661001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 |
| PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE75F4 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
BnaC07g19420D
Coordinates
chrLK031812:+:927111..929355
Molecular Weight (calculated)
50040.7 Da
IEP (calculated)
5.403
GRAVY (calculated)
-0.607
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDYLLNESA PTEDNASTAM EAFIRTNHSS LWPQPPVPTP SLPSLSQFNE DTLQQRLQAL IESAGEKWTY AIFWQISHDF ESPTGDNAVV LGWGDGYYKG
101: EEDKEKKKKS SNSNPAEQEH RKREVTDTEW FFLVSMTQSF ANGVGLPGES FLNSRVIWLS GSGALTGSGC ERASQGQIYG LQTMVCIAAE NGVVELGSSE
201: AISQSSDLMD KVNSLFNSNN GMLSFSTVVR STAKSGESDH SDLEASVVKE AIVVEPEKKP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYSLRAVVP
301: NVSKMDKASL LGDAISYINE LKSKLQQAES DKEEIQKQLD GMSKEGNGKS GASRAVRERK SSYQDSASSV EMEIDVKIIG WDVMIRVQCS KKNHPGSRFM
401: DALKELDLEV NHASLSVVND LMIQQATVKM GSQFFNHDQL KAALMLKVGG DN
101: EEDKEKKKKS SNSNPAEQEH RKREVTDTEW FFLVSMTQSF ANGVGLPGES FLNSRVIWLS GSGALTGSGC ERASQGQIYG LQTMVCIAAE NGVVELGSSE
201: AISQSSDLMD KVNSLFNSNN GMLSFSTVVR STAKSGESDH SDLEASVVKE AIVVEPEKKP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYSLRAVVP
301: NVSKMDKASL LGDAISYINE LKSKLQQAES DKEEIQKQLD GMSKEGNGKS GASRAVRERK SSYQDSASSV EMEIDVKIIG WDVMIRVQCS KKNHPGSRFM
401: DALKELDLEV NHASLSVVND LMIQQATVKM GSQFFNHDQL KAALMLKVGG DN
001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
Arabidopsis Description
BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.