Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75588 | Sorghum | nucleus | 100.0 | 100.0 |
| Zm00001d031717_P001 | Maize | nucleus | 85.93 | 88.98 |
| OQU80777 | Sorghum | nucleus | 66.54 | 62.5 |
| OQU80778 | Sorghum | nucleus | 63.88 | 62.22 |
| KXG25462 | Sorghum | nucleus | 57.79 | 54.68 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 57.79 | 54.48 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 52.09 | 52.09 |
| OQU86344 | Sorghum | nucleus | 48.67 | 50.0 |
| EER99201 | Sorghum | nucleus | 53.99 | 47.97 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 50.19 | 47.83 |
| Bra017527.1-P | Field mustard | nucleus | 27.0 | 31.42 |
| Bra013263.1-P | Field mustard | nucleus | 26.24 | 25.46 |
| Bra024992.1-P | Field mustard | nucleus | 23.95 | 23.25 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 30.42 | 22.16 |
| KRH47834 | Soybean | nucleus | 36.5 | 20.69 |
| Solyc10g009290.1.1 | Tomato | nucleus | 35.36 | 20.62 |
| KRH06400 | Soybean | nucleus | 36.12 | 20.39 |
| CDY70013 | Canola | nucleus | 19.39 | 20.24 |
| PGSC0003DMT400014097 | Potato | nucleus | 34.22 | 19.69 |
| PGSC0003DMT400028057 | Potato | nucleus | 28.9 | 19.54 |
| PGSC0003DMT400014089 | Potato | nucleus | 28.52 | 19.53 |
| PGSC0003DMT400047220 | Potato | nucleus | 33.46 | 19.47 |
| Solyc01g096370.2.1 | Tomato | nucleus | 33.08 | 19.33 |
| AT4G00870.1 | Thale cress | nucleus, plastid | 30.8 | 19.15 |
| Solyc08g083170.1.1 | Tomato | extracellular | 27.76 | 18.86 |
| Solyc10g009270.2.1 | Tomato | nucleus | 28.14 | 18.83 |
| VIT_15s0048g02820.t01 | Wine grape | nucleus | 34.22 | 18.11 |
| PGSC0003DMT400031899 | Potato | plastid | 29.28 | 17.87 |
| Bra017520.1-P | Field mustard | nucleus | 30.04 | 15.86 |
| AT5G46830.1 | Thale cress | nucleus | 30.42 | 15.66 |
| Bra017523.1-P | Field mustard | nucleus | 30.04 | 15.58 |
| EES01345 | Sorghum | nucleus | 27.38 | 14.88 |
| Bra010178.1-P | Field mustard | nucleus | 33.46 | 14.67 |
| Bra024998.1-P | Field mustard | nucleus | 32.32 | 14.66 |
| PGSC0003DMT400015017 | Potato | nucleus | 25.1 | 14.47 |
| Solyc08g005050.2.1 | Tomato | nucleus | 25.48 | 14.44 |
| PGSC0003DMT400002963 | Potato | nucleus | 32.7 | 14.38 |
| Solyc08g008600.2.1 | Tomato | nucleus | 24.71 | 14.38 |
| AT5G46760.1 | Thale cress | nucleus | 32.32 | 14.36 |
| AT1G32640.1 | Thale cress | nucleus | 33.84 | 14.29 |
| AT4G17880.1 | Thale cress | nucleus | 31.56 | 14.09 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 34.6 | 13.73 |
| KRH75613 | Soybean | nucleus | 33.08 | 13.66 |
| KRH74418 | Soybean | nucleus | 33.08 | 13.55 |
| KRH45440 | Soybean | nucleus | 33.46 | 13.46 |
| EER93685 | Sorghum | mitochondrion | 18.63 | 13.17 |
| OQU92034 | Sorghum | nucleus | 15.59 | 12.93 |
| EES10849 | Sorghum | nucleus | 16.73 | 12.75 |
| Solyc08g076930.1.1 | Tomato | nucleus | 33.08 | 12.63 |
| PGSC0003DMT400045204 | Potato | nucleus | 33.08 | 12.54 |
| KXG39824 | Sorghum | nucleus | 15.21 | 12.27 |
| Bra024993.1-P | Field mustard | nucleus | 17.49 | 12.2 |
| EER93684 | Sorghum | nucleus | 17.49 | 11.95 |
| KRH39540 | Soybean | nucleus | 33.08 | 11.9 |
| KXG39194 | Sorghum | nucleus | 31.94 | 11.88 |
| KXG37866 | Sorghum | nucleus | 16.73 | 11.86 |
| KXG37671 | Sorghum | nucleus | 15.97 | 11.8 |
| OQU92032 | Sorghum | nucleus | 15.21 | 11.76 |
| KXG24110 | Sorghum | nucleus | 17.11 | 11.31 |
| OQU77369 | Sorghum | nucleus | 17.49 | 10.95 |
| EES19274 | Sorghum | nucleus | 23.19 | 10.39 |
| OQU75589 | Sorghum | nucleus | 15.21 | 10.39 |
| EER99993 | Sorghum | nucleus | 23.57 | 9.97 |
| OQU82119 | Sorghum | nucleus | 20.15 | 9.71 |
| OQU82120 | Sorghum | nucleus | 20.53 | 9.18 |
| OQU82117 | Sorghum | nucleus | 20.15 | 8.98 |
| OQU81560 | Sorghum | nucleus | 19.39 | 8.66 |
| OQU88697 | Sorghum | nucleus | 20.15 | 7.83 |
| Bra013264.1-P | Field mustard | nucleus | 4.94 | 4.38 |
| CDY70012 | Canola | nucleus | 2.28 | 2.25 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:8155625 | UniProt:C6JSR8 | ncoils:Coil | ProteinID:EES20417.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | ProteinID:KXG18657.1 | ProteinID:OQU75588.1 | EnsemblPlants:OQU80776 | ProteinID:OQU80776 | ProteinID:OQU80776.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF68 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3007G183050 |
| SUPFAM:SSF47459 | UniParc:UPI0001AFF6D0 | RefSeq:XP_002488895.1 | InterPro:bHLH_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:+:61608735..61609526
Molecular Weight (calculated)
28106.1 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.323
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MDELVYPASS CSSPSPTSFS AAGHFEELEF VSWDVPEEWM EGNDWFDEPL ADGDEGCRSA GNGDLSGSGE PPAPAPAPKR RGRKPGPRTN GPTISHVEAE
101: RQRRDKLNRR FCELRAAVPT VSRMDRASLL AAAAAYIGEL RDRVEQLEAE AKQAASAAVT TAAAAAATHH HHSFGLLQGK LGLEVRMLAG LDAAALRLTT
201: TTARHAPAHL MLALRSLDLQ VQHACVCRVN GVAVQDAVVD VPAGLRDERG LRAALLHKLQ QSG
101: RQRRDKLNRR FCELRAAVPT VSRMDRASLL AAAAAYIGEL RDRVEQLEAE AKQAASAAVT TAAAAAATHH HHSFGLLQGK LGLEVRMLAG LDAAALRLTT
201: TTARHAPAHL MLALRSLDLQ VQHACVCRVN GVAVQDAVVD VPAGLRDERG LRAALLHKLQ QSG
001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
Arabidopsis Description
MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.