Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g008600.2.1 | Tomato | nucleus | 91.67 | 92.48 |
| PGSC0003DMT400031899 | Potato | plastid | 56.14 | 59.4 |
| PGSC0003DMT400014089 | Potato | nucleus | 37.06 | 44.01 |
| PGSC0003DMT400028057 | Potato | nucleus | 37.06 | 43.44 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 34.21 | 43.21 |
| PGSC0003DMT400014097 | Potato | nucleus | 39.47 | 39.39 |
| PGSC0003DMT400047220 | Potato | nucleus | 38.38 | 38.72 |
| PGSC0003DMT400028054 | Potato | cytosol | 16.45 | 38.07 |
| PGSC0003DMT400028052 | Potato | nucleus | 16.45 | 36.95 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 11.4 | 31.71 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 15.13 | 28.05 |
| TraesCSU01G222600.1 | Wheat | nucleus | 15.13 | 28.05 |
| TraesCS1D01G374800.1 | Wheat | nucleus | 16.23 | 27.92 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 15.35 | 27.34 |
| TraesCS5D01G313600.1 | Wheat | nucleus | 16.67 | 27.24 |
| TraesCS5D01G313500.1 | Wheat | nucleus | 16.67 | 27.24 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 16.01 | 27.24 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 14.25 | 27.2 |
| TraesCS2A01G448500.1 | Wheat | nucleus | 15.13 | 26.95 |
| TraesCS5A01G306200.1 | Wheat | nucleus | 16.45 | 26.88 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 16.45 | 26.79 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 16.23 | 26.52 |
| Zm00001d031717_P001 | Maize | nucleus | 14.69 | 26.38 |
| TraesCS5A01G306700.1 | Wheat | peroxisome | 15.79 | 26.28 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 15.13 | 26.24 |
| TraesCS5A01G306600.1 | Wheat | nucleus | 15.79 | 26.18 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 15.79 | 26.09 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 15.57 | 26.01 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 16.01 | 25.98 |
| TraesCS5D01G313700.1 | Wheat | nucleus | 15.57 | 25.82 |
| TraesCS7D01G102200.1 | Wheat | nucleus | 14.47 | 25.78 |
| TraesCS1A01G369200.1 | Wheat | nucleus | 11.18 | 25.76 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 11.84 | 25.71 |
| TraesCS5D01G313400.1 | Wheat | nucleus | 15.35 | 25.64 |
| Zm00001d006150_P001 | Maize | nucleus | 16.23 | 25.43 |
| PGSC0003DMT400002963 | Potato | nucleus | 33.11 | 25.25 |
| OQU75588 | Sorghum | nucleus | 14.47 | 25.1 |
| OQU80776 | Sorghum | nucleus | 14.47 | 25.1 |
| OQU80777 | Sorghum | nucleus | 15.35 | 25.0 |
| EER99201 | Sorghum | nucleus | 16.23 | 25.0 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 14.91 | 24.91 |
| Zm00001d052728_P001 | Maize | nucleus | 14.91 | 24.73 |
| KXG25462 | Sorghum | nucleus | 14.91 | 24.46 |
| HORVU5Hr1G079900.1 | Barley | cytosol | 14.47 | 24.44 |
| PGSC0003DMT400033757 | Potato | nucleus | 11.18 | 24.29 |
| Os09t0519100-00 | Rice | nucleus | 14.04 | 24.24 |
| TraesCS5A01G306400.1 | Wheat | nucleus | 11.84 | 24.22 |
| PGSC0003DMT400051672 | Potato | nucleus | 25.22 | 24.11 |
| Zm00001d021164_P001 | Maize | nucleus | 15.13 | 23.79 |
| OQU80778 | Sorghum | nucleus | 14.04 | 23.7 |
| PGSC0003DMT400045204 | Potato | nucleus | 35.09 | 23.05 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 34.43 | 22.95 |
| OQU86344 | Sorghum | nucleus | 12.72 | 22.66 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 13.82 | 22.58 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 34.21 | 22.51 |
| TraesCS1D01G196900.1 | Wheat | nucleus | 34.21 | 22.45 |
| Zm00001d030028_P001 | Maize | nucleus | 34.65 | 22.41 |
| KXG39194 | Sorghum | nucleus | 34.43 | 22.21 |
| Zm00001d047017_P001 | Maize | nucleus | 34.21 | 22.19 |
| Os10t0575000-01 | Rice | nucleus | 33.99 | 22.17 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 33.33 | 21.93 |
| PGSC0003DMT400078698 | Potato | nucleus | 9.43 | 20.57 |
| PGSC0003DMT400000652 | Potato | nucleus | 26.97 | 20.57 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 25.88 | 20.42 |
| PGSC0003DMT400078696 | Potato | nucleus | 12.94 | 17.0 |
| PGSC0003DMT400013074 | Potato | nucleus | 12.72 | 16.43 |
| PGSC0003DMT400078699 | Potato | nucleus | 10.09 | 14.24 |
| PGSC0003DMT400033569 | Potato | nucleus | 18.42 | 14.24 |
| PGSC0003DMT400032140 | Potato | nucleus | 9.87 | 12.5 |
Protein Annotations
| EntrezGene:102601277 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M1A599 |
| InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | EnsemblPlantsGene:PGSC0003DMG400005860 | PGSC:PGSC0003DMG400005860 | EnsemblPlants:PGSC0003DMT400015017 |
| PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF99 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000296E535 |
| RefSeq:XP_006352213.1 | InterPro:bHLH_dom | : | : | : | : |
Description
DNA binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005860]
Coordinates
chr8:-:5557762..5560545
Molecular Weight (calculated)
51794.5 Da
IEP (calculated)
6.680
GRAVY (calculated)
-0.406
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MENIISTSST PSQPNTLQKI LQYIIHNRQE WWVYAIFWQA SKDVNNRLIL SWGDGHFRGT KDTIGSAKIG YDQYHQLQKK FGFNGINDTN NNVTDTEWFY
101: MVSMPQCFVA EDELVLRAYT SASHVWLASY YELQLYNCER AKEANLHGIR TIVCISTTSG VVELGSSDII QENWEFVQFI RSLFGSNNNM NTTSHLPVNQ
201: VTLGDHHKVA KCGSPQQEED IIVKQEVAIG NLLSESGNSD FENDDSSTIN NIVNRSIKRA KKGDSSNITR EMAMDVHVEA ERKRREKLNH RFYALRSVVP
301: YVSKMDKASL LGDAVTYINE LKAKIKNLES KLIEPQKKHI LMEQHDSHSA SSTIVTEHGA NNKSLFSSNG ARNGMEIEVK IIGSEGVIRV QSLDMNYPCT
401: RLMNAMKELK FQIYHASISS VKDLMLQDIV IRVPEEFLNE EMLKSAIISK LSVIEN
101: MVSMPQCFVA EDELVLRAYT SASHVWLASY YELQLYNCER AKEANLHGIR TIVCISTTSG VVELGSSDII QENWEFVQFI RSLFGSNNNM NTTSHLPVNQ
201: VTLGDHHKVA KCGSPQQEED IIVKQEVAIG NLLSESGNSD FENDDSSTIN NIVNRSIKRA KKGDSSNITR EMAMDVHVEA ERKRREKLNH RFYALRSVVP
301: YVSKMDKASL LGDAVTYINE LKAKIKNLES KLIEPQKKHI LMEQHDSHSA SSTIVTEHGA NNKSLFSSNG ARNGMEIEVK IIGSEGVIRV QSLDMNYPCT
401: RLMNAMKELK FQIYHASISS VKDLMLQDIV IRVPEEFLNE EMLKSAIISK LSVIEN
001: MSPTNVQVTD YHLNQSKTDT TNLWSTDDDA SVMEAFIGGG SDHSSLFPPL PPPPLPQVNE DNLQQRLQAL IEGANENWTY AVFWQSSHGF AGEDNNNNNT
101: VLLGWGDGYY KGEEEKSRKK KSNPASAAEQ EHRKRVIREL NSLISGGVGG GDEAGDEEVT DTEWFFLVSM TQSFVKGTGL PGQAFSNSDT IWLSGSNALA
201: GSSCERARQG QIYGLQTMVC VATENGVVEL GSSEIIHQSS DLVDKVDTFF NFNNGGGEFG SWAFNLNPDQ GENDPGLWIS EPNGVDSGLV AAPVMNNGGN
301: DSTSNSDSQP ISKLCNGSSV ENPNPKVLKS CEMVNFKNGI ENGQEEDSSN KKRSPVSNNE EGMLSFTSVL PCDSNHSDLE ASVAKEAESN RVVVEPEKKP
401: RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYSLRAVVP NVSKMDKASL LGDAISYISE LKSKLQKAES DKEELQKQID VMNKEAGNAK SSVKDRKCLN
501: QESSVLIEME VDVKIIGWDA MIRIQCSKRN HPGAKFMEAL KELDLEVNHA SLSVVNDLMI QQATVKMGNQ FFTQDQLKVA LTEKVGECP
101: VLLGWGDGYY KGEEEKSRKK KSNPASAAEQ EHRKRVIREL NSLISGGVGG GDEAGDEEVT DTEWFFLVSM TQSFVKGTGL PGQAFSNSDT IWLSGSNALA
201: GSSCERARQG QIYGLQTMVC VATENGVVEL GSSEIIHQSS DLVDKVDTFF NFNNGGGEFG SWAFNLNPDQ GENDPGLWIS EPNGVDSGLV AAPVMNNGGN
301: DSTSNSDSQP ISKLCNGSSV ENPNPKVLKS CEMVNFKNGI ENGQEEDSSN KKRSPVSNNE EGMLSFTSVL PCDSNHSDLE ASVAKEAESN RVVVEPEKKP
401: RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYSLRAVVP NVSKMDKASL LGDAISYISE LKSKLQKAES DKEELQKQID VMNKEAGNAK SSVKDRKCLN
501: QESSVLIEME VDVKIIGWDA MIRIQCSKRN HPGAKFMEAL KELDLEVNHA SLSVVNDLMI QQATVKMGNQ FFTQDQLKVA LTEKVGECP
Arabidopsis Description
MYC4Transcription factor MYC4 [Source:UniProtKB/Swiss-Prot;Acc:O49687]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.