Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g083170.1.1 | Tomato | extracellular | 77.96 | 86.82 |
| PGSC0003DMT400015017 | Potato | nucleus | 59.4 | 56.14 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 37.59 | 44.88 |
| PGSC0003DMT400014089 | Potato | nucleus | 37.82 | 42.45 |
| PGSC0003DMT400028057 | Potato | nucleus | 37.59 | 41.65 |
| PGSC0003DMT400014097 | Potato | nucleus | 41.3 | 38.95 |
| PGSC0003DMT400047220 | Potato | nucleus | 39.91 | 38.05 |
| PGSC0003DMT400028054 | Potato | cytosol | 16.24 | 35.53 |
| PGSC0003DMT400028052 | Potato | nucleus | 16.47 | 34.98 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 18.79 | 32.93 |
| TraesCSU01G222600.1 | Wheat | nucleus | 18.79 | 32.93 |
| TraesCS1D01G374800.1 | Wheat | nucleus | 20.19 | 32.83 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 21.11 | 32.62 |
| TraesCS1A01G369200.1 | Wheat | nucleus | 14.85 | 32.32 |
| TraesCS5D01G313600.1 | Wheat | nucleus | 20.88 | 32.26 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 19.03 | 32.03 |
| TraesCS2A01G448500.1 | Wheat | nucleus | 19.03 | 32.03 |
| TraesCS5D01G313500.1 | Wheat | nucleus | 20.65 | 31.9 |
| TraesCS5A01G306200.1 | Wheat | nucleus | 20.65 | 31.9 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 20.65 | 31.79 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 12.06 | 31.71 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 19.95 | 31.5 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 19.49 | 31.34 |
| TraesCS5A01G306600.1 | Wheat | nucleus | 19.72 | 30.91 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 18.79 | 30.8 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 19.72 | 30.8 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 19.95 | 30.61 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 16.94 | 30.54 |
| TraesCS5D01G313400.1 | Wheat | nucleus | 19.26 | 30.4 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 19.26 | 30.4 |
| Zm00001d031717_P001 | Maize | nucleus | 17.87 | 30.32 |
| Os09t0519100-00 | Rice | nucleus | 18.56 | 30.3 |
| TraesCS5A01G306700.1 | Wheat | peroxisome | 19.26 | 30.29 |
| TraesCS5D01G313700.1 | Wheat | nucleus | 19.26 | 30.18 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 14.39 | 29.52 |
| TraesCS7D01G102200.1 | Wheat | nucleus | 17.4 | 29.3 |
| OQU80776 | Sorghum | nucleus | 17.87 | 29.28 |
| OQU75588 | Sorghum | nucleus | 17.87 | 29.28 |
| Zm00001d006150_P001 | Maize | nucleus | 19.72 | 29.21 |
| Zm00001d052728_P001 | Maize | nucleus | 18.56 | 29.09 |
| EER99201 | Sorghum | nucleus | 19.95 | 29.05 |
| HORVU5Hr1G079900.1 | Barley | cytosol | 18.1 | 28.89 |
| Zm00001d021164_P001 | Maize | nucleus | 19.26 | 28.62 |
| OQU80778 | Sorghum | nucleus | 17.63 | 28.15 |
| OQU86344 | Sorghum | nucleus | 16.71 | 28.12 |
| KXG25462 | Sorghum | nucleus | 18.1 | 28.06 |
| TraesCS5A01G306400.1 | Wheat | nucleus | 14.39 | 27.8 |
| OQU80777 | Sorghum | nucleus | 17.63 | 27.14 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 16.47 | 25.45 |
| PGSC0003DMT400051672 | Potato | nucleus | 27.15 | 24.53 |
| PGSC0003DMT400002963 | Potato | nucleus | 33.64 | 24.25 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 35.73 | 22.51 |
| PGSC0003DMT400033757 | Potato | nucleus | 10.9 | 22.38 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 35.5 | 22.08 |
| PGSC0003DMT400045204 | Potato | nucleus | 35.5 | 22.05 |
| TraesCS1D01G196900.1 | Wheat | nucleus | 35.5 | 22.01 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 34.57 | 21.5 |
| Os10t0575000-01 | Rice | nucleus | 34.8 | 21.46 |
| Zm00001d047017_P001 | Maize | nucleus | 34.8 | 21.34 |
| Zm00001d030028_P001 | Maize | nucleus | 34.8 | 21.28 |
| KXG39194 | Sorghum | nucleus | 34.57 | 21.07 |
| PGSC0003DMT400078698 | Potato | nucleus | 9.74 | 20.1 |
| PGSC0003DMT400000652 | Potato | nucleus | 27.61 | 19.9 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 26.68 | 19.9 |
| PGSC0003DMT400078696 | Potato | nucleus | 12.99 | 16.14 |
| PGSC0003DMT400013074 | Potato | nucleus | 12.53 | 15.3 |
| PGSC0003DMT400033569 | Potato | nucleus | 20.42 | 14.92 |
| PGSC0003DMT400078699 | Potato | nucleus | 10.67 | 14.24 |
| PGSC0003DMT400032140 | Potato | nucleus | 10.9 | 13.06 |
Protein Annotations
| EntrezGene:102588761 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M1AWG4 |
| InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | EnsemblPlantsGene:PGSC0003DMG400012237 | PGSC:PGSC0003DMG400012237 | EnsemblPlants:PGSC0003DMT400031899 |
| PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF99 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000295E1A5 |
| RefSeq:XP_015162598.1 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
MYC2 [Source:PGSC_GENE;Acc:PGSC0003DMG400012237]
Coordinates
chr8:+:56655324..56656786
Molecular Weight (calculated)
48792.7 Da
IEP (calculated)
7.231
GRAVY (calculated)
-0.382
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDFISSSST SLLNTLQKRL HYIIHNRQEW WVYAIFWQAS KDTNGRLIFS WGDGHFRDTN DLALTKVHIA NADSNVSDME MFYAVSAPNC FVSEDDLIVH
101: AYNSGSYVWL NNYYELQLYN YDRAKEAHLH GIRTLVCIST PHGVVELGSS QVIPENLELV QLIKSLFGLS NNNNNSPSQG VSSFNFVPLG DHILQREMNT
201: KEIIMGNKSS DSGNSDYDNE SSAINKDANS PKKRGRKSSS STIERATAKN HVEAERQRRE KLNHRFYALR SVVPNVSKMD KASLLADAVT YINELKAKVE
301: EFKGKVEELE SSKIIQKNRN YSFTEMYSAS SAVVDRTNNI INSSFAAYGM EVEVKIIGVE AMIRVRSPNV NYPCARLMNV LRELEFQIHH ASVSSVKEMM
401: QQDVVIKIPH NVTNDEAIKS VILTKLSLAY I
101: AYNSGSYVWL NNYYELQLYN YDRAKEAHLH GIRTLVCIST PHGVVELGSS QVIPENLELV QLIKSLFGLS NNNNNSPSQG VSSFNFVPLG DHILQREMNT
201: KEIIMGNKSS DSGNSDYDNE SSAINKDANS PKKRGRKSSS STIERATAKN HVEAERQRRE KLNHRFYALR SVVPNVSKMD KASLLADAVT YINELKAKVE
301: EFKGKVEELE SSKIIQKNRN YSFTEMYSAS SAVVDRTNNI INSSFAAYGM EVEVKIIGVE AMIRVRSPNV NYPCARLMNV LRELEFQIHH ASVSSVKEMM
401: QQDVVIKIPH NVTNDEAIKS VILTKLSLAY I
001: MINTDDNLLM IEALLTSDPS PPLLPANLSL ETTLPKRLHA VLNGTHEPWS YAIFWKPSYD DFSGEAVLKW GDGVYTGGNE EKTRGRLRRK KTILSSPEEK
101: ERRSNVIREL NLMISGEAFP VVEDDVSDDD DVEVTDMEWF FLVSMTWSFG NGSGLAGKAF ASYNPVLVTG SDLIYGSGCD RAKQGGDVGL QTILCIPSHN
201: GVLELASTEE IRPNSDLFNR IRFLFGGSKY FSGAPNSNSE LFPFQLESSC SSTVTGNPNP SPVYLQNRYN LNFSTSSSTL ARAPCGDVLS FGENVKQSFE
301: NRNPNTYSDQ IQNVVPHATV MLEKKKGKKR GRKPAHGRDK PLNHVEAERM RREKLNHRFY ALRAVVPNVS KMDKTSLLED AVCYINELKS KAENVELEKH
401: AIEIQFNELK EIAGQRNAIP SVCKYEEKAS EMMKIEVKIM ESDDAMVRVE SRKDHHPGAR LMNALMDLEL EVNHASISVM NDLMIQQANV KMGLRIYKQE
501: ELRDLLMSKI S
101: ERRSNVIREL NLMISGEAFP VVEDDVSDDD DVEVTDMEWF FLVSMTWSFG NGSGLAGKAF ASYNPVLVTG SDLIYGSGCD RAKQGGDVGL QTILCIPSHN
201: GVLELASTEE IRPNSDLFNR IRFLFGGSKY FSGAPNSNSE LFPFQLESSC SSTVTGNPNP SPVYLQNRYN LNFSTSSSTL ARAPCGDVLS FGENVKQSFE
301: NRNPNTYSDQ IQNVVPHATV MLEKKKGKKR GRKPAHGRDK PLNHVEAERM RREKLNHRFY ALRAVVPNVS KMDKTSLLED AVCYINELKS KAENVELEKH
401: AIEIQFNELK EIAGQRNAIP SVCKYEEKAS EMMKIEVKIM ESDDAMVRVE SRKDHHPGAR LMNALMDLEL EVNHASISVM NDLMIQQANV KMGLRIYKQE
501: ELRDLLMSKI S
Arabidopsis Description
BHLH28Transcription factor bHLH28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.