Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0402800-01 | |
| Os04t0653000-01 | |
| Os07t0615200-01 | |
| Os08t0428400-01 | |
| Os09t0439200-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031717_P001 | Maize | nucleus | 52.47 | 54.33 |
| Os09t0519100-00 | Rice | nucleus | 53.23 | 53.03 |
| OQU75588 | Sorghum | nucleus | 52.09 | 52.09 |
| OQU80776 | Sorghum | nucleus | 52.09 | 52.09 |
| Zm00001d052728_P001 | Maize | nucleus | 53.61 | 51.27 |
| OQU80777 | Sorghum | nucleus | 52.85 | 49.64 |
| KXG25462 | Sorghum | nucleus | 52.47 | 49.64 |
| OQU80778 | Sorghum | nucleus | 47.53 | 46.3 |
| OQU86344 | Sorghum | nucleus | 44.87 | 46.09 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 47.91 | 45.16 |
| Bra017527.1-P | Field mustard | nucleus | 25.48 | 29.65 |
| Bra013263.1-P | Field mustard | nucleus | 25.86 | 25.09 |
| Bra024992.1-P | Field mustard | nucleus | 25.1 | 24.35 |
| Os01t0577300-00 | Rice | cytosol | 10.65 | 22.95 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 29.66 | 21.61 |
| CDY70013 | Canola | nucleus | 20.15 | 21.03 |
| Solyc10g009290.1.1 | Tomato | nucleus | 34.98 | 20.4 |
| PGSC0003DMT400014097 | Potato | nucleus | 34.98 | 20.13 |
| PGSC0003DMT400014089 | Potato | nucleus | 29.28 | 20.05 |
| PGSC0003DMT400028057 | Potato | nucleus | 29.66 | 20.05 |
| KRH06400 | Soybean | nucleus | 35.36 | 19.96 |
| AT4G00870.1 | Thale cress | nucleus, plastid | 31.94 | 19.86 |
| KRH47834 | Soybean | nucleus | 34.22 | 19.4 |
| Solyc10g009270.2.1 | Tomato | nucleus | 28.52 | 19.08 |
| PGSC0003DMT400047220 | Potato | nucleus | 32.7 | 19.03 |
| Solyc08g083170.1.1 | Tomato | extracellular | 27.76 | 18.86 |
| PGSC0003DMT400031899 | Potato | plastid | 30.8 | 18.79 |
| Solyc01g096370.2.1 | Tomato | nucleus | 31.94 | 18.67 |
| VIT_15s0048g02820.t01 | Wine grape | nucleus | 33.46 | 17.71 |
| Os01t0705700-01 | Rice | nucleus | 28.52 | 16.3 |
| Solyc08g008600.2.1 | Tomato | nucleus | 26.62 | 15.49 |
| PGSC0003DMT400015017 | Potato | nucleus | 26.24 | 15.13 |
| AT5G46830.1 | Thale cress | nucleus | 29.28 | 15.07 |
| Bra017520.1-P | Field mustard | nucleus | 28.14 | 14.86 |
| Bra017523.1-P | Field mustard | nucleus | 28.52 | 14.79 |
| Os12t0632600-00 | Rice | nucleus | 19.77 | 14.77 |
| Bra024998.1-P | Field mustard | nucleus | 31.56 | 14.31 |
| Os03t0671800-01 | Rice | nucleus | 20.15 | 13.77 |
| Bra010178.1-P | Field mustard | nucleus | 31.18 | 13.67 |
| AT4G17880.1 | Thale cress | nucleus | 30.04 | 13.41 |
| PGSC0003DMT400002963 | Potato | nucleus | 30.42 | 13.38 |
| Os01t0576100-00 | Rice | nucleus | 15.97 | 13.38 |
| Solyc08g005050.2.1 | Tomato | nucleus | 23.57 | 13.36 |
| Os03t0229100-00 | Rice | plastid | 14.45 | 13.29 |
| AT5G46760.1 | Thale cress | nucleus | 29.66 | 13.18 |
| AT1G32640.1 | Thale cress | nucleus | 31.18 | 13.16 |
| KRH75613 | Soybean | nucleus | 31.18 | 12.87 |
| KRH45440 | Soybean | nucleus | 31.56 | 12.69 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 31.18 | 12.37 |
| KRH74418 | Soybean | nucleus | 30.04 | 12.31 |
| PGSC0003DMT400045204 | Potato | nucleus | 31.94 | 12.1 |
| Solyc08g076930.1.1 | Tomato | nucleus | 31.56 | 12.05 |
| Os03t0725800-01 | Rice | nucleus | 16.35 | 11.98 |
| Bra024993.1-P | Field mustard | nucleus | 17.11 | 11.94 |
| Os10t0575000-01 | Rice | nucleus | 30.42 | 11.44 |
| KRH39540 | Soybean | nucleus | 30.04 | 10.81 |
| Os10t0104300-00 | Rice | nucleus | 13.31 | 10.7 |
| Os01t0235700-01 | Rice | nucleus | 23.57 | 10.05 |
| Os11t0258700-00 | Rice | mitochondrion | 16.73 | 9.11 |
| Os04t0557200-01 | Rice | cytosol, nucleus, peroxisome | 19.01 | 8.94 |
| Os04t0557800-00 | Rice | mitochondrion | 19.39 | 8.89 |
| Os03t0671000-00 | Rice | mitochondrion | 6.46 | 6.69 |
| Os04t0557500-00 | Rice | mitochondrion, plasma membrane | 4.18 | 6.11 |
| Bra013264.1-P | Field mustard | nucleus | 4.56 | 4.04 |
| CDY70012 | Canola | nucleus | 2.66 | 2.62 |
| Os07t0211500-00 | Rice | nucleus | 3.42 | 1.88 |
Protein Annotations
| EntrezGene:107275552 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ProteinID:BAD08992.1 | ProteinID:BAD09724.1 | ProteinID:BAT06519.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlantsGene:Os08g0543700 | EnsemblPlants:Os08t0543700-00 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF68 |
| UniProt:Q6ZBI4 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000023ACA6 | RefSeq:XP_015649359.1 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
basic helix-loop-helix protein 011Hypothetical conserved gene. (Os08t0543700-00)
Coordinates
chr8:-:27223154..27223980
Molecular Weight (calculated)
27712.1 Da
IEP (calculated)
7.991
GRAVY (calculated)
-0.110
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MDELVLSPSS FSATACFPTL DFEFCEVPDQ WLLGLGHDEL DKDAAASALA AAAASQSASN DDVPRNPPAT TTTTKRRGRK PGPRSGGGGA PPIGHVEAER
101: QRREKLNRRF CELRAAVPTV SRMDKASLLA DAVDYIAELR RRVERLEAEA RRAPLAPSAA AAAAWAAGLG AGAIGRDDLV VRMIGRDAAI LRLTTAAAAA
201: RHAPARMMCA VRALNLAVQH ASVARVGGAT VQDVMVDDVP AALQDEARLR AALLHTLQLA DTT
101: QRREKLNRRF CELRAAVPTV SRMDKASLLA DAVDYIAELR RRVERLEAEA RRAPLAPSAA AAAAWAAGLG AGAIGRDDLV VRMIGRDAAI LRLTTAAAAA
201: RHAPARMMCA VRALNLAVQH ASVARVGGAT VQDVMVDDVP AALQDEARLR AALLHTLQLA DTT
001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
Arabidopsis Description
BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.