Factsheet for Os03t0229100-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G234700.1	Wheat	nucleus	57.69	54.82
TraesCS4D01G235900.1	Wheat	nucleus	57.34	50.93
TraesCS5A01G505100.1	Wheat	nucleus	53.15	50.84
TraesCS4A01G059100.1	Wheat	nucleus	57.34	49.4
TraesCS4D01G330500.1	Wheat	nucleus	53.85	48.73
Zm00001d028312_P001	Maize	nucleus	52.8	47.19
TraesCS4B01G345800.1	Wheat	nucleus	50.35	46.3
KXG39824	Sorghum	nucleus	52.1	45.71
TraesCS5A01G555200.1	Wheat	nucleus	49.3	45.34
TraesCS4B01G391500.1	Wheat	nucleus	48.6	43.3
TraesCS4B01G335200.1	Wheat	nucleus	34.62	40.24
TraesCS5A01G555300.1	Wheat	nucleus	32.17	37.55
Os10t0104300-00	Rice	nucleus	31.82	27.83
HORVU4Hr1G065640.6	Barley	nucleus	31.12	26.1
Os01t0577300-00	Rice	cytosol	10.84	25.41
Os03t0725800-01	Rice	nucleus	31.82	25.35
Os12t0632600-00	Rice	nucleus	27.62	22.44
Os03t0671800-01	Rice	nucleus	23.78	17.66
Os08t0543700-00	Rice	nucleus, peroxisome, plastid	13.29	14.45
Os09t0519100-00	Rice	nucleus	12.94	14.02
Os01t0576100-00	Rice	nucleus	13.64	12.42
Os01t0705700-01	Rice	nucleus	15.73	9.78
Os11t0258700-00	Rice	mitochondrion	14.69	8.7
Os04t0557200-01	Rice	cytosol, nucleus, peroxisome	16.78	8.59
Os04t0557800-00	Rice	mitochondrion	16.78	8.36
Os01t0235700-01	Rice	nucleus	17.48	8.1
Os10t0575000-01	Rice	nucleus	19.23	7.87
Os03t0671000-00	Rice	mitochondrion	6.64	7.48
Os04t0557500-00	Rice	mitochondrion, plasma membrane	1.75	2.78
Os07t0211500-00	Rice	nucleus	2.1	1.26

Protein Annotations

MapMan:15.5.32	MapMan:25.4.1.7	Gene3D:4.10.280.10	UniProt:A0A0P0VUZ8	ProteinID:BAS83090.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
EnsemblPlantsGene:Os03g0229100	EnsemblPlants:Os03t0229100-00	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR31945	PANTHER:PTHR31945:SF11
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0003939201	InterPro:bHLH_dom	SEG:seg	:

Description

basic helix-loop-helix protein 019Similar to Helix-loop-helix DNA-binding domain containing protein. (Os03t0229100-00)

Coordinates

chr3:-:6826703..6832274

Molecular Weight (calculated)

30665.2 Da

IEP (calculated)

10.424

GRAVY (calculated)

-0.577

Length

286 amino acids

Sequence
(BLAST)

001: MGQTGGRPGG GGGPALQRLR RHAAGKVASR SLARCREGAR RRGRQAAGQR HSGRQGSNES TTQSQPTQPS PSSSNVLSFA GQVQGSTTTL DFSGRGWQQD
101: DGVGVFQQPP ERRSRPPANA QEHVIAERKR REKLQQQFVA LATIVPGLKK VYKISLLGST IDYVKQLEEK VKALEEGSRR TAEPTTAFES KCRITVDDDD
201: GGSASSGTDD GSSSSSSPTV EASIHGNTVL LKICCKERRG LLVMILSELE KQGLSIINTS VVPFTDSCLN ITITAKARLA LPVYYS

Best Arabidopsis Sequence Match ( AT4G37850.2 )
(BLAST)

001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI

Arabidopsis Description

BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.